Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq285313 163 4e-35 >seq285313 Length=1148134 Score = 163 bits (180), Expect = 4e-35 Identities = 360/540 (67%), Gaps = 0/540 (0%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || ||||| ||||| || || || Sbjct 650962 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTCCCATTGAAG 650903 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | | || ||||| || ||||| || || ||||| || |||| || || Sbjct 650902 AAATCCTGCAGGAGTTTCTGAATCTTGGGGATACGGGTTGATCCGCCAACCAGTACAATG 650843 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | || ||||| || | || | || || || | || || ||||| |||| | Sbjct 650842 TCATGGATTTGTGATTTGTCTAGTTTGGCATCCCGCAGGGCCTTCTCTACAGGATCCAGA 650783 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| || | | || |||||||| || | ||| || || || || Sbjct 650782 GTGCCACGGAACAGATCAGCATTTAACTCTTCAAAACGAGCTCTGGTTATTGAGGTGTAA 650723 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| ||| || || | ||| ||||||||||| | | || | | || || | Sbjct 650722 AAGTCAATGCCCTCATAGAGCGAGTCAATTTCAATACTGGCCTGAGTGCTAGAGGAGAGA 650663 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || || ||||| || || |||| || |||| || | | ||| | | | Sbjct 650662 GTACGCTTAGCACGTTCACATGCTGTGCGTAGCCGGCGAACTGCTCTCTTGTTCTCAGTA 650603 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||| || ||||| || || || || ||| || | | | ||| Sbjct 650602 ATGTCCTTCTTGTGCTTACGCTTGAATTCAGCAATGAAATGATTGACCATACGGTTATCA 650543 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || || || ||||||||||| ||||| || || || | || ||||||||||| || | Sbjct 650542 AAGTCCTCCCCACCCAAGTGGGTATCACCAGCAGTTGACTTCACTTCAAAGATGCCATCC 650483 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | | |||||||| || || ||||| || |||||||| || || || ||| Sbjct 650482 TCAATAGTGAGGATTGAAACATCGAAAGTGCCACCCCCAAGGTCAAAGATAAGGACATTC 650423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632857277960800