Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq283574 86.0 7e-12 >seq283574 Length=3212210 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| ||||| ||||| || |||||||||| ||||| || ||| ||||| | |||| Sbjct 1560408 TTGCCTTTGCTGCAGTGGAAGGAATCTTCTTCT-CGGGTTCTTTTGCTGCTATATTTTGG 1560466 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| ||||||| ||||| || || ||||| ||||| || ||| | ||||| Sbjct 1560467 CTGAAGAAGAGGGGTCTTATGCCTGGACTGACATTCTCCAATGAGCTCATTAGCAGAGAT 1560526 Query 65206 GAGG 65209 |||| Sbjct 1560527 GAGG 1560530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594432240265600