Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq284675 95.1 2e-14 >seq284675 Length=1105255 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 155817 AATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAA 155876 || |||||||| || ||| | ||||| |||||||| || || || || ||||||| || Sbjct 341652 AAGAAAATGCAGATCTTTGTAAAAACCTTGACTGGCAAGACCATCACGCTAGAAGTAGAG 341593 Query 155877 GATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCA 155936 ||| | ||| || || || ||||| || || ||||||||||| |||||| Sbjct 341592 CCCAGTGACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCA 341533 Query 155937 GAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || || || ||||| | ||| || |||||||| |||||| Sbjct 341532 GATCAGCAGAGGTTGATCTTTGCTGGGAAGCAGCTAGAAGAT 341491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729249885592000