Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq284051 84.2 5e-11 >seq284051 Length=2145588 Score = 84.2 bits (92), Expect = 5e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG-TGCTTTCTGTGCTATCTTTTG 131922 ||||||||||| || ||||| || ||||| || || | |||| | |||||||||| Sbjct 1497900 GTAGCTTTTGCAGCAGTGGAAGGAATCTTCTTCTCCGGCTCCTTTGCAT-CTATCTTTTG 1497842 Query 131923 GCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGA 131982 ||| |||||| | || || |||||||||||| | || || ||| || ||||| ||||| Sbjct 1497841 GCTGAAGAAGAGAGGGTTAATGCCTGGACTCACTTTTTCTAATGAACTCATCAGTAGAGA 1497782 Query 131983 TGA 131985 ||| Sbjct 1497781 TGA 1497779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1182454445101820