Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq283893 118 1e-21 >seq283893 Length=4807905 Score = 118 bits (130), Expect = 1e-21 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || || ||||| | ||| || |||||||| || || ||||| || ||||| Sbjct 4300404 CTTCAGGCCTGTGACATGGGCAATCATATATGTGAGCAGTGAATAACTGGCGATATTGAA 4300463 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || ||||| || |||||||| || || ||||| |||| |||||| || || || || | Sbjct 4300464 AGGCACCCCTAGTCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATT 4300523 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 || ||||||||||| ||| |||||| || |||| ||||| Sbjct 4300524 TAGAACATAAAACTGGCAAAGGGCGTGGCATGGAGGCAAAGCCAT 4300568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581397508368000