Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq283224 86.0 9e-12 >seq283224 Length=1912038 Score = 86.0 bits (94), Expect = 9e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 213995 CAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTT 214054 ||| | ||| | || ||| | |||||||| || || ||||| | | || | ||| | Sbjct 1452957 CAGCTGATTCATGGAGAAATGTACCCTCCCACTGTGAAGGACACACAAGCAGAAATGATG 1453016 Query 214055 TACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTC 214114 ||| || ||||| || | || || || | | || | ||| ||||||| | Sbjct 1453017 TACCCTCCTCATGTTCCTGAGCACTTGCGATTTTCTGTAGGCCAGGAGGTGTTTGGTTTG 1453076 Query 214115 GTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGAC 214174 || || ||||| ||| |||| |||| || ||||| |||||||| ||| | || || ||| Sbjct 1453077 GTCCCAGGTTTAATGATGTATGCCACAATATGGCTCAGAGAGCATAACCGAGTCTGTGAC 1453136 Query 214175 GTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCA 214221 | || || || | ||| || || ||| | || || ||||||||||| Sbjct 1453137 ATCCTTAAGCAGGTGCATCCAGAGTGGGATGATGAGCAGCTGTTCCA 1453183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720749250748800