Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03]
286,620 sequences; 1,931,078,847 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq283574 86.0 8e-12
>seq283574
Length=3212210
Score = 86.0 bits (94), Expect = 8e-12
Identities = 95/124 (77%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737
||||||||| | ||| || ||||| ||||| || || ||||| ||||||| |||||
Sbjct 1560530 CCTCATCTCTGCTAATGAGCTCATTGGAGAATGTCAGTCCAGGCATAAGACCCCTCTTCT 1560471
Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
||| |||| | ||||| ||| || ||||| |||||||||| || ||||| |||||
Sbjct 1560470 TCAGCCAAAATATAGCAGCAAAAGAACCCG-AGAAGAAGATTCCTTCCACTGCAGCAAAG 1560412
Query 122797 GCAA 122800
||||
Sbjct 1560411 GCAA 1560408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 625781918352000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |