Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq189952 89.7 6e-13 >seq189952 Length=2645 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 105497 GGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTG 105556 ||| || | ||||| || ||| | ||||||||||||| || || || || || |||||| Sbjct 433 GGTGTTAGAAACAGCCTACTCCTTTCTCCAATGCCAACTGCTTCTACTGCTCAGATCTTG 374 Query 105557 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCG 105616 || ||||| || | | |||| |||||||| | |||||||| | | ||| ||| || Sbjct 373 GGGAATAACGAGTCCATTGAGCCCTACACCAGTAACATCTACACGCGCAGAGTCCTTTCG 314 Query 105617 GGAGAGTTT 105625 ||||||||| Sbjct 313 GGAGAGTTT 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581171122368800