Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq283893 89.7 4e-13 >seq283893 Length=4807905 Score = 89.7 bits (98), Expect = 4e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 27488 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGT 27547 |||| || |||| || || || || || ||||| ||||| || ||||| ||||||| | Sbjct 4761402 TCATATCTTTGTATTCAGCCCCAAAGTGTCTCCACTGGAAACCATACACTGGTCCCAAAT 4761461 Query 27548 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 | || || || || | | ||| || || ||||| ||||| | || || ||||| | Sbjct 4761462 CCCCTTCCTCTCTCTTATTGAAACCTTGTTTATCCAAGAAGTCACGTGATCCATTGGCAT 4761521 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||| ||||| || || || | ||||||||||| | ||||| || || Sbjct 4761522 CCCAAATCTTCACTCCTTTTGCAGAGAGCTCTTTAGCATTTGTTGAACC 4761570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368216444377220