Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq76943 114 9e-21 >seq76943 Length=1194919 Score = 114 bits (126), Expect = 9e-21 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| |||||| | || | || ||||| || ||||| || ||||||||||| Sbjct 632472 GTGACATGGGCAATCATATACGTGAGAAGTGAATAACTGGCAATATTGAAAGGCACCCCG 632531 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 |||||||| || | ||||| ||||| ||||| || || || | |||| |||||| Sbjct 632532 AGTCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGAACATAA 632591 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAG 97287 ||||| | || | || || || ||||| |||||| || || ||||||| Sbjct 632592 AACTGGCACAGAGCGTGGCATGGAGGCAAAGCCATTAGTGAAATATCTAAG 632642 Score = 87.8 bits (96), Expect = 1e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 97397 CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTT 97456 ||| |||||| |||||||| || ||||| ||||| ||||| || ||||| | || |||| Sbjct 639349 CTTTATATTCAGCTCCAAAGTGTCTCCACTGGAAACCATACACTGGTCCCAAATCCCCTT 639408 Query 97457 CTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAA 97516 || ||| || |||||| | ||||| || | | |||||||| |||||||||| Sbjct 639409 CTGTTCTGCCAGGGAAACCTTGTTTATCCAAGAATTCACGTGATCCATTGGCATCCCAAA 639468 Query 97517 TGTGCACACCAGATGCTGCAAGCTCTTT 97544 | | ||| || ||| | |||||||| Sbjct 639469 TCTTCACTCCTTTTGCAGAGAGCTCTTT 639496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346192202592110