Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18]
140,023 sequences; 2,208,410,377 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq76943 86.0 1e-11
seq78831 84.2 4e-11
>seq76943
Length=1194919
Score = 86.0 bits (94), Expect = 1e-11
Identities = 115/156 (74%), Gaps = 3/156 (2%)
Strand=Plus/Minus
Query 35571 TTCACCTTATGGCTCTTCCTCCATGCCACA-TGACTGCTCAATTTTATGTGGCTAATGGA 35629
||||| | |||||| | |||||||||||| | ||| || |||||||| |||||
Sbjct 632633 TTCAC-TAATGGCTTTGCCTCCATGCCACGCTCTGTGC-CAGTTTTATGTTCTAAATGGT 632576
Query 35630 GAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAAT 35689
||| |||| ||||||||||||||| || ||||| | || | || ||||| ||||||
Sbjct 632575 GAACTGTCTTGCCAGTTGTATCAGAGATCTGGAGACATGGGACTCGGGGTGCCTTTCAAT 632516
Query 35690 ATTGCATCATACTCTCTTCTGACTCATCTGATGGCC 35725
||||| || || ||||| || || |||| |||
Sbjct 632515 ATTGCCAGTTATTCACTTCTCACGTATATGATTGCC 632480
>seq78831
Length=713705
Score = 84.2 bits (92), Expect = 4e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||||||||| || ||||| |||||||| ||| | || || | || || |||
Sbjct 196919 GTTGCCTTTGCTGCCGTGGAAGGGATCTTCTTCTCAGGTTCTTTTGCTGCTATATTTTGG 196978
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028
| ||||| |||||| | ||||||| || || | |||||||||| |||||
Sbjct 196979 CTGAAGAAGAGGGGTCTGATGCCTGGACTGACATTCTCCAATGAGCTCATT 197029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 987808642081965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |