Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq10001 91.5 2e-13 >seq10001 Length=4979691 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCC 21181 || |||||||| || ||||| | | |||| |||||| ||||||||| | |||| Sbjct 1094995 TTCATTTAAAAGTCTGCATCCAGAGTGAAAGAGTTATCTGTGGGTTTTGACATTACTCCC 1095054 Query 21182 ATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATA 21241 || || || || || | |||| || || || || || ||||| ||||||| ||| ||| Sbjct 1095055 ATCTTCTGGTATTCTCCTACTCGCTTCTCAAAGAAGTTAGTCTTGCCTTCCAGTGAGATA 1095114 Query 21242 GATTCCATAAAATCAAATGGATTTTCAGATTTAAATAT 21279 ||||| || ||||||||||| || | ||| ||||| Sbjct 1095115 TTCTCCATGAAGTCAAATGGATTCTCTGCTTTGAATAT 1095152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530969820678520