Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq73165 84.2 6e-11 >seq73165 Length=823064 Score = 84.2 bits (92), Expect = 6e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 12829 CCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTTTTCCTGTTTTTACA 12888 ||||| ||||| |||||||||| ||||| || | ||||| |||| || | ||| || Sbjct 18916 CCAAAGGTCAGGCAATCCATGTCCTCAGTGGCAGCTGCATAGACTTTGCCAGCTTTCACT 18857 Query 12889 TATGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAACGACCGGAATGCCCATTAGG 12948 | | ||||| | ||||| ||||||| |||||| | || ||||||||||| ||| Sbjct 18856 AAGGTGGCACAGCTGGCTTCAGCCTCACCTGGTGCCTCCACATAAGGAATGCCCATGAGG 18797 Query 12949 GTTAGCATCTTTTT 12962 || |||| ||| || Sbjct 18796 GTCAGCAGCTTCTT 18783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301015325397986