Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq108923 87.8 2e-12 >seq108923 Length=1180579 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 ||||| || ||||| || ||||| || || ||| | ||| ||| |||| || Sbjct 1013509 TGCAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGC 1013450 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| || | ||||| | ||||| || || |||||||||||||| ||||| ||||| Sbjct 1013449 TTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTG 1013390 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | |||||| | ||| ||||| || || | |||||||| || Sbjct 1013389 GCCTTGACATTCTCAATGGTGTCACTGGGCTCCACTTCTAGGGTGATGGTTTTGCCCGTC 1013330 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||||| ||||| || ||||| Sbjct 1013329 AAGGTTTTCACAAAGATCTGCAT 1013307 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 ||||| || ||||| || ||||| || || ||| | ||| ||| ||||| || Sbjct 1013737 TGCAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAACTGC 1013678 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| || | ||||| | ||||| || || |||||||||||||| ||||| ||||| Sbjct 1013677 TTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTG 1013618 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | |||||| | ||| || || || || | |||||||| || Sbjct 1013617 GCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTTTTGCCCGTC 1013558 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||||| ||||| || ||||| Sbjct 1013557 AAGGTTTTCACAAAGATCTGCAT 1013535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451212064449080