Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq78831 91.5 2e-13 >seq78831 Length=713705 Score = 91.5 bits (100), Expect = 2e-13 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| ||||| ||||| || ||||||||||| || || || ||| ||||| | |||| Sbjct 196920 TTGCCTTTGCTGCCGTGGAAGGGATCTTCTTCTCAGGTTC-TTTTGCTGCTATATTTTGG 196978 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| ||||||| ||||| || || ||||| ||||| || ||| ||||||| Sbjct 196979 CTGAAGAAGAGGGGTCTGATGCCTGGACTGACATTCTCCAATGAGCTCATTAGCCGAGAT 197038 Query 65206 GAGG 65209 |||| Sbjct 197039 GAGG 197042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595525431686240