Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq10001 96.9 3e-15 >seq10001 Length=4979691 Score = 96.9 bits (106), Expect = 3e-15 Identities = 129/175 (74%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 21124 TAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCC 21183 |||||| ||||| || | || ||||| | ||| | ||||| |||| | ||| |||| Sbjct 664514 TAGCATATGGGGACCAACATGTGATGGACTGGATCGTATTGTAGAGCGCTTTGATATGCC 664573 Query 21184 AGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGC--TTACAGCTTGGTC 21241 |||||| ||||| || || ||| | |||||||||||||||| || ||||| ||| | Sbjct 664574 AGAGCTGCAAGTTGGTGATTGGATGCTATTTGAAAACATGGGTGCCTATACAG-TTG--C 664630 Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 |||| |||| || || || || |||| | ||||| || ||||||| || ||| Sbjct 664631 AGCTGCTTCCACTTTCAATGGATTCCAGAGGCCAGCAATAAACTATGTGATGTCA 664685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462734261930640