Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq78831 87.8 4e-12 >seq78831 Length=713705 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 ||| | || || |||||| || ||||| || ||||| |||||| |||| |||||| Sbjct 196913 AGAGTGGTTGCCTTTGCTGCCGTGGAAGGGATCTTCTTCTCAGGTTCTTTTGCTGCTATA 196972 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCAT 131973 |||||||| |||||| | || ||||||||||||| |||| |||||| | |||| Sbjct 196973 TTTTGGCTGAAGAAGAGGGGTCTGATGCCTGGACTGACATTCTCCAATGAGCTCAT 197028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1184683604801103