Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18]
140,023 sequences; 2,208,410,377 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq108923 131 2e-25
seq51508 111 1e-19
>seq108923
Length=1180579
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || |||||||| |||| || ||| ||| | || ||||||||||| || |||||
Sbjct 1013497 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAG 1013438
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||||| |||||| || | ||||| || || ||||| ||| || ||| | | |
Sbjct 1013437 ATCAACCTCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTC 1013378
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | ||||| || | ||||| ||||| |||||||| |||||||||
Sbjct 1013377 TCAATGGTGTCACTGGGCTCCACTTCTAGGGTGATGGTTTTGCCCGTCAAGGTTTTCACA 1013318
Query 35726 AATATCTGCATT 35737
|| |||||||||
Sbjct 1013317 AAGATCTGCATT 1013306
Score = 129 bits (142), Expect = 5e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || |||||||| |||| || ||| ||| | || |||| |||||| || |||||
Sbjct 1013725 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAACTGCTTTCCGGCAAAG 1013666
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||||| |||||| || | ||||| || || ||||| ||| || ||| | | |
Sbjct 1013665 ATCAACCTCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTC 1013606
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | |||||||| | ||||| ||||| |||||||| |||||||||
Sbjct 1013605 TCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTTTTGCCCGTCAAGGTTTTCACA 1013546
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 1013545 AAGATCTGCAT 1013535
>seq51508
Length=10579796
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| || | || ||||||||||| || |||||
Sbjct 7030279 TCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCTTCCAGCTGCTTGCCTGCAAAG 7030338
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | || | || || |||||| |||||| ||| | | |
Sbjct 7030339 ATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTC 7030398
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || || || ||||| || ||||||
Sbjct 7030399 TCAATAGTGTCACTGGGCTCAACCTCTAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 7030458
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 7030459 AAGATCTGCAT 7030469
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| || | || ||||||||||| || |||||
Sbjct 7029823 TCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCTTCCAGCTGCTTGCCTGCAAAG 7029882
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | || | || || |||||| |||||| ||| | | |
Sbjct 7029883 ATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTC 7029942
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || || || |||| || ||||||
Sbjct 7029943 TCAATAGTGTCACTGGGCTCAACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACA 7030002
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 7030003 AAGATCTGCAT 7030013
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| || | || ||||||||||| || |||||
Sbjct 7030051 TCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCTTCCAGCTGCTTGCCTGCAAAG 7030110
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | || | || || |||||| |||||| ||| | | |
Sbjct 7030111 ATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTC 7030170
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || || || |||| || ||||||
Sbjct 7030171 TCAATAGTGTCACTGGGCTCAACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACA 7030230
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 7030231 AAGATCTGCAT 7030241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450004581596840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |