Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq62279 98.7 1e-15 >seq62279 Length=12999854 Score = 98.7 bits (108), Expect = 1e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 214092 TGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGA 214151 |||| | |||||||| || || |||| || ||||| |||| || | |||||||| Sbjct 4166649 TGGGCCAGGAGATGTTCGGCCTGCTGCCGGGGCTCATGATGTATGCGACCATCTGGCTTC 4166590 Query 214152 GAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAAC 214211 | ||||||||| | || |||||||||||||| || ||||| || |||| |||||| | Sbjct 4166589 GTGAGCACAACCGAGTCTGCGACGTGCTGAAGCAGGAGCATCCAACGTGGAGCGACGAGC 4166530 Query 214212 AGCTGTTCCAGA 214223 |||| ||||||| Sbjct 4166529 AGCTCTTCCAGA 4166518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722074745639520