Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq76943 114 1e-20 >seq76943 Length=1194919 Score = 114 bits (126), Expect = 1e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| || ||||| |||||||| || | ||||| ||||| ||||| |||||||| | Sbjct 632474 GACATGGGCAATCATATACGTGAGAAGTGAATAACTGGCAATATTGAAAGGCACCCCGAG 632533 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||||||||| |||| ||||| | |||||| ||||| || ||||| || || || Sbjct 632534 TCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGAACATAAAA 632593 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAG 6771 ||||| || | |||||| || || | ||||| || Sbjct 632594 CTGGCACAGAGCGTGGCATGGAGGCAAAGCCATTAG 632629 Score = 114 bits (126), Expect = 1e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 34574 CTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTG 34633 || ||||| | || || |||||| | || ||||| || || || ||||| || ||| Sbjct 632629 CTAATGGCTTTGCCTCCATGCCACGCTCTGTGCCAGTTTTATGTTCTAAATGGTGAACTG 632570 Query 34634 TCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCT 34693 || |||||| | ||||| |||| ||||||||||| | |||||||| ||||| ||||| Sbjct 632569 TCTTGCCAGTTGTATCAGAGATCTGGAGACATGGGACTCGGGGTGCCTTTCAATATTGCC 632510 Query 34694 AGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 ||||| | || |||||||| ||||| || |||||| Sbjct 632509 AGTTATTCACTTCTCACGTATATGATTGCCCATGTC 632474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447477811924560