Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq78526 109 4e-19
seq20 109 4e-19
>seq78526
Length=7101863
Score = 109 bits (120), Expect = 4e-19
Identities = 113/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||| ||||| || || |||||||| || |||||||| ||||| | ||| ||||
Sbjct 5479905 CTTTGTATTCAGCTCCAAAGTGTCTCCACTGGAAACCATACACTGGTCCCAAATCCCCTT 5479964
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| ||||||| ||||| ||||||| || ||| | |||||||| ||||||||||
Sbjct 5479965 CTGTTCTGTCAGTGAAACCTTGTTTATCCAAGAATTCACGTGATCCATTGGCATCCCAAA 5480024
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT 102180
| | ||| || ||| || ||||||||
Sbjct 5480025 TCTTCACTCCTTTTGCAGAGAGCTCTTT 5480052
>seq20
Length=13974604
Score = 109 bits (120), Expect = 4e-19
Identities = 90/110 (82%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || || |||| || || | |||||||||| ||||||| || || |||||||||||
Sbjct 8507581 CTTGAGCTCTCTGCTAAGCACTATATTAATTCTGTCTTTTAAGGGGCGATTCTTCTCAGG 8507522
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
|||||||||||| ||| | |||||||| |||| | |||||||||| |||
Sbjct 8507521 AATTGAGAACCAGGTCCTCTTACCCATTATCAACACATTCTGTTTACCTG 8507472
Score = 86.0 bits (94), Expect = 5e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 4058 GTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGA 4117
||||||||||||| | ||||| |||||||||||| ||||||| |||||| || |||| |
Sbjct 8537640 GTTTGTATTTCTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCAAACTCATGCAAAA 8537581
Query 4118 TCCTAGTCACAAACA 4132
| || ||||||||||
Sbjct 8537580 TTCTTGTCACAAACA 8537566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360905165942345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |