Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq99 105 8e-18
seq281 95.1 1e-14
>seq99
Length=4336708
Score = 105 bits (116), Expect = 8e-18
Identities = 116/153 (76%), Gaps = 5/153 (3%)
Strand=Plus/Minus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGC-TCCTAGG 83449
|||||| || |||||||| || ||||| || ||||| ||||||| ||| | | | ||
Sbjct 2597383 CCTGGTAGCCAAACTGGTTGCAAGGGAAGCCCAGCACGACCAGCCGCCGCGGGTACCGGG 2597324
Query 83450 CGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCT 83509
| |||||||| ||| | ||| ||||| ||||| ||||| | ||||||||||| ||
Sbjct 2597323 C----CTGCAGCTGGTTGAGCTGGGTGTAATCCCGCACCGTCGTGCCTCAGAGGGATGCC 2597268
Query 83510 ACGTTCTCGATGAGCAAGACCCGGCCCCGTAAG 83542
|||||||| || | | ||||||||||| |||
Sbjct 2597267 ACGTTCTCAATCAAAACCACCCGGCCCCGGAAG 2597235
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCG 83115
||| ||| || |||||||||||| | ||| | ||||||| | | ||||||| |
Sbjct 2600201 GAGGAGGCGCTGGATGTCGGGCTCGATGGCAATGGTCTGGAACTTGGGGCTGTAGCGTTT 2600142
Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175
| |||| || || | ||||||| |||||||||||||||||||| | ||||| |||
Sbjct 2600141 GAAGGGCTCCCCCTCGGGCCCCACCAGGAACTTCTCGAAGTTCCAGGAGAGGTCGTCGCG 2600082
Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCA 83213
|| ||| || ||| | | || || |||||||| ||
Sbjct 2600081 GCGCACGGGGCTCCACACGACGAACTTGGGGTCGCCCA 2600044
>seq281
Length=978875
Score = 95.1 bits (104), Expect = 1e-14
Identities = 112/147 (76%), Gaps = 5/147 (3%)
Strand=Plus/Minus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
||||||| ||||||||||| || ||||| | ||||| |||| |||| | | || ||
Sbjct 866093 CCTGGTGGCCGAACTGGTTGCAGGGGAAGGCCAGCACGGCCAG--CCCGGACCCATA-GC 866037
Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510
||| |||||||||| | | ||| | | | |||||| ||||| | |||||||| ||||| |
Sbjct 866036 GCCTCTGCAGCTCGCTGAGCTGGGCGAAGTCCCGGGCCGTGGTGCCTCAGAGCGACGCCA 865977
Query 83511 CGTT-CTCGATGAGCAAGACCCGGCCC 83536
|||| ||| | |||| || ||||||
Sbjct 865976 CGTTGCTC-ACCAGCAGTACGCGGCCC 865951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608198695193800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |