Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq3 102 2e-16 >seq3 Length=75876001 Score = 102 bits (112), Expect = 2e-16 Identities = 104/133 (78%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 || ||||||||||| || | ||||||||||| |||||| ||||||||| || ||||| Sbjct 66054388 GCTTTTTTTGGAGCCCAAATGAATTCTTTTATTCATGTTGTTATGTACATGTACTATGGA 66054447 Query 52117 ATGGCCGCTTGTGGTCCT-ATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175 | || || ||||| ||| | |||||||| ||||| ||||||||||| || | || || Sbjct 66054448 TTAGCTGCCTGTGGCCCTAAATTTCAGAAA-TATCTGTGGTGGAAACGATACTTGACCAT 66054506 Query 52176 AATGCAGTTGGTA 52188 | | || |||||| Sbjct 66054507 ATTACAATTGGTA 66054519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922289816843800