Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_002641.1
Length=159160
Score E
Sequences producing significant alignments: (Bits) Value
seq119 145 8e-30
>seq119
Length=3317459
Score = 145 bits (160), Expect = 8e-30
Identities = 282/417 (68%), Gaps = 9/417 (2%)
Strand=Plus/Plus
Query 125104 CTTACCCATCCGCCGTGCTCCCGCAACCACTCGCCCTGCTCTTCGGCCAGGTACGCGGCC 125163
|||||||| ||||||||| || || |||||||| || ||| ||||||||||| | ||||
Sbjct 879397 CTTACCCAGCCGCCGTGCGCCTCCAGCCACTCGCGCTTCTCCTCGGCCAGGTAGGAGGCC 879456
Query 125164 AGCGCTGCGGCCAAGCGGCTTGGCCCTTCCTCACAGCCGTTTTCGTACAGCGCCGTTGCC 125223
||| | |||||||||||| | | | ||| | ||| | ||| |||||||| |||
Sbjct 879457 AGCACCTCGGCCAAGCGGCCCGCCTCCTCCCGGCTGCCCTGCTCGGCCAGCGCCGCCGCC 879516
Query 125224 AGCGAGCCGCCGAGGACTATGGTCGCCAGGCATCGACCCCAGTTGAAGCCGCTTCCGGAG 125283
|| || ||| || | |||||| ||| |||||||| | ||||| | |
Sbjct 879517 AGGCTCCCCGCGAACACCACCAGCGCCAGCACTCGGCCCCAGTTCAGGCCGCCCTCCGCC 879576
Query 125284 TTCA---ATTCAGACACCACACTTTGCAGCGCCGACAACGCTGCCTGCGTGCCGCCGCTC 125340
| || || | |||| || ||||||||| | ||| || ||| || |
Sbjct 879577 TCCAGCTGCTCCGCCACCCGGCTCAGCAGCGCCGCC--GGCTCCCGGCG-CTCGTCCAGG 879633
Query 125341 GCTAACGGCGCGCAGGAGCGAAAGAAGGGCCTCTCTCGCCGCTCCAGCTCGGCCGCCGCT 125400
|| | ||| ||||| ||| |||||||||| ||| || | |||||||||| |||||
Sbjct 879634 GCCAGCGGGCGGCAGGCGCGGAAGAAGGGCCGCTCCCGGCTCTCCAGCTCGCTGGCCGCC 879693
Query 125401 CGCCGNNNNNNNNNNNNNGTAGGACTCGGCGGCGGCCCTTCCTTGCCGC---AGCAGTGC 125457
||||| | || || ||||||||| || ||| | || ||||
Sbjct 879694 CGCCGCAGCGTCTCGGCCGCGGGGCTGGGCGGCGGCAGCGCCGGGCCCCCCAGGCGGTGC 879753
Query 125458 TGGAAGTAATCCTCCAGCAGCAACGCCGTTTCTTCCTTCAGGGAGTCAGCCATGGCT 125514
||||||||||| ||||||||| |||||| | |||||||| ||| | | |||||||
Sbjct 879754 TGGAAGTAATCGCCCAGCAGCAGCGCCGTCTGCTCCTTCAGCGAGCCCGGCATGGCT 879810
Score = 140 bits (154), Expect = 3e-28
Identities = 283/418 (68%), Gaps = 11/418 (3%)
Strand=Plus/Minus
Query 157082 AGCCATGGCTGACTCCCTGAAGGAAGAAACGGCGTTGCTGCTGGAGGATTACTTCCAGCA 157141
||||||| | | ||| |||||||| | |||||| ||||||||| ||||||||||||||
Sbjct 879810 AGCCATGCCGGGCTCGCTGAAGGAGCAGACGGCGCTGCTGCTGGGCGATTACTTCCAGCA 879751
Query 157142 CTGCT---GCGGCAAGGAAGGGCCGCCGCCGAGTCCTACGGCGGCAGA-GCTGCGGCGAG 157197
| || | ||| || ||||||||| || || |||| | ||| ||||||||| |
Sbjct 879750 CCGCCTGGGGGGCCCGGCGCTGCCGCCGCCCAGCCCCGCGGCCG-AGACGCTGCGGCGGG 879692
Query 157198 CNNNNNNNNNNNNNGAGCGGCGAGAGAGGCCCTTCTTTCGCTCCTGCGCGCCGTTAGCGA 157257
| ||| | || ||| |||||||||| ||| ||||| ||| | ||
Sbjct 879691 CGGCCAGCGAGCTGGAGAGCCGGGAGCGGCCCTTCTTCCGCGCCTGCCGCCCGCTGGCCC 879632
Query 157258 GCGGCGGCACGCAGGCAGCGTTGTCGGCGCTGCAAAGTGTGGTGTCTGAAT---TGAACT 157314
| || ||| || ||| | ||||||||| || |||| | || || |
Sbjct 879631 TGGACGAG-CGCCGGGAGCC--GGCGGCGCTGCTGAGCCGGGTGGCGGAGCAGCTGGAGG 879575
Query 157315 CCGGAAGCGGCTTCAACTGGGGTCGATGCCTGGCGACCATAGTCCTCGGCGGCTCGCTGG 157374
| | ||||| | |||||||| ||| |||||| | || ||| || ||||
Sbjct 879574 CGGAGGGCGGCCTGAACTGGGGCCGAGTGCTGGCGCTGGTGGTGTTCGCGGGGAGCCTGG 879515
Query 157375 CAACGGCGCTGTACGAAAACGGCTGTGAGGAAGGGCCAAGCCGCTTGGCCGCAGCGCTGG 157434
| |||||||| ||| | ||| | ||| | | | |||||||||||| | |||||
Sbjct 879514 CGGCGGCGCTGGCCGAGCAGGGCAGCCGGGAGGAGGCGGGCCGCTTGGCCGAGGTGCTGG 879455
Query 157435 CCGCGTACCTGGCCGAAGAGCAGGGCGAGTGGTTGCGGGAGCACGGCGGATGGGTAAG 157492
|| | ||||||||||| ||| || |||||||| || || ||||||||| ||||||||
Sbjct 879454 CCTCCTACCTGGCCGAGGAGAAGCGCGAGTGGCTGGAGGCGCACGGCGGCTGGGTAAG 879397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 508683758544000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |