Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq78569 376 2e-99
seq30 127 1e-24
>seq78569
Length=9971662
Score = 376 bits (416), Expect = 2e-99
Identities = 692/1012 (68%), Gaps = 2/1012 (0%)
Strand=Plus/Plus
Query 107626 ATTACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGT 107685
||||| | ||| | || | ||||| | |||||| || | |||| ||| | |||
Sbjct 6848715 ATTACGTGAACTTGACTAAGGACTGCACTCACTTCAAAGCGCGCAGGAGGTTTGTTGAGT 6848774
Query 107686 TCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGA 107745
||||||| || ||||| ||| ||| || || ||||| || || ||||| || |||||||
Sbjct 6848775 TCCCACTAAGCAAAGAGGAGGAAGATTTTCCTATTGCATATTCCATGGTAGTGCATGAGA 6848834
Query 107746 AGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTG 107805
||||||| | || ||| | || | | || | || | || ||||| ||||||||||
Sbjct 6848835 AGATTGAGATGTTCGAAAGATTGTTAAGGTCCATCTACACGCCCCAGAATATATACTGTG 6848894
Query 107806 TCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCT 107865
||||||| ||| |||| ||||| || ||||| ||||| ||| | || ||||
Sbjct 6848895 TCCACGTAGATCTGAAATCCCCGGACGAATTCAAGGAGGCAGTCCGAGGGATCGCCTCCT 6848954
Query 107866 GCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCA 107925
||||| |||||||| |||||| ||| ||| || || || || |||||||||
Sbjct 6848955 GCTTCGAAAATGTCTTTGTGGCCACTAAACTGGAGAGAGTAGTGTACGCATCCTGGTCCC 6849014
Query 107926 GAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGT 107985
| || ||||| ||||||||||| ||||| || | ||| ||||| ||||| |||| ||
Sbjct 6849015 GGGTCCAAGCGGACCTGAACTGCATGGAGGAGCTACTCAAGAGCAACGTGCCCTGGAGGT 6849074
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045
| | | || || ||||| || || |||||||| || || || |||||||| ||||
Sbjct 6849075 ATCTCTTAAACACTTGCGGCACCGATTTCCCCATCAAAACTAACGCCGAGATTGTCCGAA 6849134
Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaa 108105
|||| ||| | | || || || |||| |||||| |||||| ||| || | |||
Sbjct 6849135 CCCTGAAGTTTCTAAATGGGAAAAACAATATGGAATCTGAGAAACCCTCGTCGATCAAGG 6849194
Query 108106 aaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGA 108165
||||||||| |||| | | | ||| || | || || ||| || | ||
Sbjct 6849195 CGGCTCGCTGGAAGTACCACCACCACGTGGAGAACTCGGTGATCCGAACCGCCACGGAGA 6849254
Query 108166 AGGACCCTCCC-CCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCT 108224
| || |||||| || || | |||||||||||| || ||||||||| |||||| | |
Sbjct 6849255 A-GAGCCTCCCGCCCCATGGCTCACCCATGTTCACGGGCAATGCCTATGTTGTGGTCACA 6849313
Query 108225 CGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTC 108284
| | |||||| ||| |||| || ||||| | | || | ||| | || |||
Sbjct 6849314 AGGGACTTTGTTCAAGCCCTCTTTGAAAACCCGACGGCGCAGCGGCTGCTGGAGTGGTCA 6849373
Query 108285 AAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATG 108344
||||| || || ||||| || ||| | | ||||||||||| || || || | |||
Sbjct 6849374 AAAGATACTTACAGCCCAGATGAATATATTTGGGCCACCCTCCACCGGATGCCAGGCATG 6849433
Query 108345 CCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGG 108404
|| || || || ||| || |||||| | |||| || | | ||| | || ||
Sbjct 6849434 CCAGGATCGGTGCCTTATAACGATAAGTATGAGGTCTCTGATGTCAATGCTGTTGCTAGA 6849493
Query 108405 CTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGC 108464
| || |||||| |||| ||||| |||||||||| ||||| || || | || ||
Sbjct 6849494 TTGGTGAAGTGGTCCTACCTGGAGGGCGATGTCAGCAAAGGGGCACCCTACCCTCCGTGT 6849553
Query 108465 TCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTC 108524
| || ||| | ||||| |||| | || |||| || || || ||||||| |||
Sbjct 6849554 ACGGGTGCCCACCAACGGGCCGTCTGTGTGTATGGGGTAGGTGATCTTCACTGGATGCTC 6849613
Query 108525 CAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAG 108584
|| |||||||| || | || |||||||||||||| | || ||||| |||| | |||
Sbjct 6849614 CAAAACCATCATCTGCTAGCCAACAAGTTTGACCCAAATGTAGATGAAAACGCAATCCAG 6849673
Query 108585 TGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGACTGAACTTTGAG 108636
|| | || || || |||||| | ||| | | || |||| || || ||||
Sbjct 6849674 TGTCTGGAGGAATATCTACGTTACAAGTCAGTGTACGGGAGAGATCTCTGAG 6849725
>seq30
Length=9398747
Score = 127 bits (140), Expect = 1e-24
Identities = 571/889 (64%), Gaps = 37/889 (4%)
Strand=Plus/Minus
Query 107688 CCACTGAGTAAAGAAG-AGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAA 107746
|| || |||||||||| |||| || || || |||||||| || || ||||| || | ||
Sbjct 5820364 CCTCTCAGTAAAGAAGAAGCTGGA-TTTCCAATTGCCTATTCAATAGTGGTATATCACAA 5820306
Query 107747 GATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGT 107806
|| || | |||| | || || || | | ||||| |||||||| ||||| |
Sbjct 5820305 AATAGACATGCTTGATAGACTTCTAAGATCAATCTATGCTCCTCAGAATTATTACTGCAT 5820246
Query 107807 CCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTG 107866
|| || || ||||| ||||| |||| | || || |||| ||| | |||||
Sbjct 5820245 TCATGTTGACAAAAAGTCTCCAGAATCTTTTCTGGCAGCAGTTAAGGGAATTGTGTCCTG 5820186
Query 107867 CTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAG 107926
||| |||||||| || ||||| | |||| || || ||||| || ||| |||
Sbjct 5820185 TTTCAATAATGTCTTTATTGCCAGCCAATTGGAGAGTGTAGTGTATGCTTCGTGGAGCAG 5820126
Query 107927 AGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAG 107984
|| || || ||||| ||||| ||| |||| | || ||| | ||| | | |||||
Sbjct 5820125 GGTACAGGCAGACCTCAACTGCATGAAAGA-TCTCTACAG-GAGAAGTACAAACTGGAAA 5820068
Query 107985 TACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTG 108044
|| || | ||| || || | ||||| || || |||||||| || ||||| |
Sbjct 5820067 TATTTGATAAATCTTTGTGGTATGGACTTTCCTATTAAGACCAACCAGGAAATGGTGGAG 5820008
Query 108045 GCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG---GTACCTTCTGAGTCC 108101
| || | |||||| | ||||| | || ||||| | ||||| || |
Sbjct 5820007 AAATTGAAAGCCCTAAAGGGTGAAAACAGCTTAGAAACTGAGAAAATGCCTTC-CAG--C 5819951
Query 108102 aaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAG 108161
||| ||| || |||||| | | |||||| | | | ||| ||| | ||
Sbjct 5819950 AAAGAAATACGATGGAAAAAACACTATGAAATTGTTG----ATGGTAAGCTA--AAGAAC 5819897
Query 108162 ATG---------AAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTAT 108212
||| || | ||||| ||| || | ||| | ||| | || | |||||||
Sbjct 5819896 ATGGGAATAGACAAACAACCTCCACCTCTTAGTACACCTGTTTTCTCTGGCAGTGCCTAT 5819837
Query 108213 TTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAAC-CCTAAATCCCAAAGACT 108271
||||| || | | ||||| | |||| |||||||| | |||||| | | |
Sbjct 5819836 TTTGTTGCTAGTAGGAGTTTTGTAGAGTATGTGCTAGACAACAGCAAAATCCTTGA-ATT 5819778
Query 108272 GGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG 108331
||||||||| |||||||| |||||||| || ||| || | ||||| || |||| |
Sbjct 5819777 TATTGAATGGGCTAAAGACACTTATAGCCCTGATGAATACTTGTGGGCTACTATTCAAAG 5819718
Query 108332 TGCTCCGTGGA-TGCCTGGCTCTGT---TCCTAGCCACCCCAAGTATCACATCTCAGACA 108387
||| || | | || || | || | |||| | ||||||| | | || ||||
Sbjct 5819717 -AATCCCTGAAGTCCCAGGGGCAGTTTCTTCTAGTGA---CAAGTATGATGTTTCTGACA 5819662
Query 108388 TGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGG 108447
||| ||| | |||||| | || |||||||| || || || ||||| | || |
Sbjct 5819661 TGAATGCTCTTGCCAGGTTTGTGAAGTGGCATTATTTTGAAGGGGATGTTTCAAAAGGTG 5819602
Query 108448 CGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGG 108507
| || ||| | || ||| |||||| ||| | | | | || | | || | || |
Sbjct 5819601 CCCCCTATCCTCCGTGCAATGGAATTCATGTGCGCTCTGTGTGTGTGTTTGGTGTGGGAG 5819542
Query 108508 ACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGA 108556
|| || ||||||| | ||||| || ||||| || || |||||||||||
Sbjct 5819541 ACTTGAACTGGATGTTACAGAAACACCACCTATTTGCCAACAAGTTTGA 5819493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347935201479030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |