Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq213 185 1e-42 seq599 158 2e-34 seq1443 156 7e-34 seq21001 154 2e-33 seq78581 140 5e-29 seq78522 116 6e-22 seq27142 114 2e-21 seq1533 104 4e-18 seq78569 100 4e-17 seq78583 96.9 5e-16 seq78567 96.9 5e-16 seq8 96.9 5e-16 seq78539 80.6 4e-11 >seq213 Length=1662576 Score = 185 bits (204), Expect = 1e-42 Identities = 201/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| || ||||| | ||||| |||||||||||||| || || ||||| ||||| Sbjct 1471067 CGCTAAACGCCATCGGAAGGTGCTTCGGGATAACATCCAAGGTATTACGAAGCCGGCTAT 1471126 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| ||||||| ||||| || ||||||||| | ||||| ||| | |||||||||| Sbjct 1471127 TCGTCGTTTGGCTCGCCGTGGCGGTGTCAAGCGTATTTCTGGGTTGATTTATGAAGAGAC 1471186 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||||| | ||| | ||| ||| |||| ||||||| | || || || Sbjct 1471187 CCGTGGCGTGTTGAAGGTGTTCTTGGAGAACGTGATCCGTGATGCTGTTACTTACACTGA 1471246 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| ||||| |||||||| || || ||||||| | || ||||| ||||||| || || Sbjct 1471247 GCATGCTAAGCGTAAGACGGTTACAGCCATGGACGTGGTATATGCTCTGAAACGCCAGGG 1471306 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 ||| | | || || ||||| |||| Sbjct 1471307 CCGCACTCTGTACGGATTTGGTGGTTA 1471333 Score = 167 bits (184), Expect = 4e-37 Identities = 184/245 (75%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| ||||| | ||||| |||||||| ||||| || ||||| || ||||| Sbjct 1456093 CGCTAAGCGCCATCGGAAGGTACTTCGCGATAACATTCAAGGTATTACCAAACCGGCTAT 1456152 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| | |||||||||||||| ||||||||| | ||||| ||| |||||||||||| Sbjct 1456153 TCGTCGTTTAGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGGGTTGATCTATGAAGAGAC 1456212 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || | || | || || | | ||| |||| |||||| | ||||| || Sbjct 1456213 TCGTGGCGTGCTCAAAGTTTTTCTTGAAAACGTGATCCGCGATGCTGTTACTTATACGGA 1456272 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || || || |||||||| || ||||||| | || ||||| ||||||| || || Sbjct 1456273 ACATGCAAAGCGGAAGACTGTGACAGCCATGGACGTGGTTTATGCTCTGAAACGCCAGGG 1456332 Query 16672 CCGTA 16676 |||| Sbjct 1456333 TCGTA 1456337 Score = 163 bits (180), Expect = 4e-36 Identities = 192/260 (74%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | ||||| |||||||||||||| || |||||||||||||| Sbjct 1578447 GCCAAGCGCCATCGCAAAGTGCTTCGGGATAACATCCAAGGCATTACCAAGCCAGCTATT 1578388 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| ||||||| || || || || |||||| | || || ||| |||||||||||| Sbjct 1578387 CGTCGCTTGGCTCGACGCGGGGGGGTGAAGCGTATTTCGGGCTTGATCTATGAAGAGACC 1578328 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | ||| | ||| ||| |||| |||||| || || || || Sbjct 1578327 CGCGGAGTGCTGAAGGTGTTCTTGGAGAACGTGATCCGCGATGCTGTCACTTACACTGAA 1578268 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || || || ||||| || || | |||||| | || ||||| |||| || || || Sbjct 1578267 CATGCCAAGCGAAAGACGGTAACGGCTATGGATGTGGTTTATGCCCTGAAGCGCCAGGGT 1578208 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | | ||||||||||| Sbjct 1578207 CGCACTCTCTATGGTTTTGG 1578188 Score = 159 bits (176), Expect = 5e-35 Identities = 190/258 (74%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 16435 TAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCG 16494 |||||| ||||| | | ||||| |||||||||||||| || |||||||||||||| || Sbjct 1576696 TAAGCGCCATCGTAAAGTGCTTCGGGATAACATCCAAGGTATTACCAAGCCAGCTATTCG 1576755 Query 16495 TCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCG 16554 ||| ||||||| || || || || |||||| | || || ||| |||| ||||||| ||| Sbjct 1576756 TCGCTTGGCTCGACGCGGGGGGGTGAAGCGTATTTCGGGCTTGATCTACGAAGAGACTCG 1576815 Query 16555 TGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCA 16614 | || ||||| | ||| | ||| ||| |||| |||||| || || || || || Sbjct 1576816 CGGAGTGCTGAAGGTGTTCTTGGAGAACGTGATCCGCGATGCTGTCACTTACACTGAACA 1576875 Query 16615 CGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 || || || ||||| || || | |||||| | || ||||| |||| || || || || Sbjct 1576876 TGCCAAGCGAAAGACGGTAACGGCTATGGATGTGGTTTATGCCCTGAAGCGCCAGGGTCG 1576935 Query 16675 TAAGATTTATGGTTTTGG 16692 | | ||||||||||| Sbjct 1576936 CACTCTCTATGGTTTTGG 1576953 >seq599 Length=184155 Score = 158 bits (174), Expect = 2e-34 Identities = 180/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||| | ||||| | | || || ||||||||||| || || |||||||| || ||| Sbjct 59154 GCTAAGAGACATCGTAAAGTCCTGCGGGATAACATCCAGGGTATTACCAAGCCTGCGATC 59095 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||||||||| || || || || ||||| |||| || || |||||||||||| Sbjct 59094 CGCCGTCTGGCTCGCCGCGGCGGGGTAAAGCGCATCTCGGGGCTGATCTATGAAGAGACC 59035 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | ||||| ||| ||| |||| ||||| | ||| |||||| Sbjct 59034 CGCGGGGTGCTGAAGGTTTTCCTGGAGAACGTGATCCGCGATGCGGTGACCTACACCGAG 58975 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || || || || ||| |||||||| | ||||| || ||||||| || || Sbjct 58974 CACGCCAAGCGCAAAACCGTGACCGCCATGGATGTGGTCTACGCCCTGAAACGCCAGGGG 58915 Query 16673 CG 16674 || Sbjct 58914 CG 58913 Score = 149 bits (164), Expect = 1e-31 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| |||||||| || || |||||||| || ||||||||||||||||| |||||||| | Sbjct 55034 GAGACAACATCCAGGGCATTACCAAGCCTGCGATCCGTCGTCTGGCTCGCCGTGGTGGGG 55093 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||||| |||| || || |||| ||||||| || | || |||| | ||||| Sbjct 55094 TAAAGCGCATCTCGGGGCTGATCTACGAAGAGACCCGCGGGGTACTGAAAGTTTTCCTGG 55153 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| ||||| | ||| || |||||||| || || ||||| || || Sbjct 55154 AGAACGTGATCCGCGATGCGGTGACCTACACAGAGCACGCCAAGCGCAAGACGGTAACAG 55213 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 |||||||| | || || || |||||||| || || || Sbjct 55214 CCATGGATGTGGTATACGCCTTGAAACGCCAGGGGCG 55250 Score = 149 bits (164), Expect = 1e-31 Identities = 191/261 (73%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||| | ||||| | | || || || ||||||||||| || || |||||||| || || Sbjct 57894 GCTAAAAGACATCGGAAGGTC-CTGCGGGATAACATCCAGGGCATTACCAAGCCTGCGAT 57836 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| || || || || ||||| |||| || || |||| ||||||| Sbjct 57835 CCGCCGTCTGGCTCGCCGCGGCGGGGTGAAGCGCATCTCGGGGCTGATCTACGAAGAGAC 57776 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || |||||| | ||||| ||| ||| |||| ||||| | ||| ||||| Sbjct 57775 CCGCGGGGTGTTGAAGGTTTTCCTGGAGAACGTGATCCGCGATGCGGTGACCTACACCGA 57716 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| || || ||||||| | ||||| || ||||||| || || Sbjct 57715 GCACGCCAAGCGCAAGACGGTGACAGCCATGGACGTGGTCTACGCCCTGAAACGCCAGGG 57656 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | || ||||| || Sbjct 57655 GCGCACCCTGTACGGTTTCGG 57635 Score = 147 bits (162), Expect = 3e-31 Identities = 180/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| | || |||| | |||| || || |||||||| || || |||||||| || || Sbjct 89840 GCTAAGAGGCACCGCAAAG-TCTTGCGTGACAACATCCAGGGCATTACCAAGCCTGCGAT 89898 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| ||||| || || ||||| |||| || || |||| ||||||| Sbjct 89899 CCGCCGTCTGGCTCGCCGTGGCGGCGTGAAGCGCATCTCGGGGCTGATCTACGAAGAGAC 89958 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||||| ||| ||| |||| ||||| | ||| ||||| Sbjct 89959 CCGCGGGGTGCTGAAGGTTTTCCTGGAGAACGTGATCCGCGATGCGGTGACCTACACCGA 90018 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || || || || ||| ||||||| | ||||| || ||||||| || || Sbjct 90019 GCACGCCAAGCGCAAAACCGTGACCGCCATGGACGTGGTCTACGCCCTGAAACGCCAGGG 90078 Query 16672 CCG 16674 || Sbjct 90079 GCG 90081 >seq1443 Length=38693 Score = 156 bits (172), Expect = 7e-34 Identities = 191/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| ||||| | ||||| |||||||| ||||| || || ||||| ||||| Sbjct 34026 CGCTAAGCGCCATCGGAAGGTGCTTCGTGATAACATTCAAGGTATTACGAAGCCGGCTAT 34085 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||| | |||| || |||||||| || |||||| | ||||||||| | |||||||| | Sbjct 34086 TCGTCATTTGGCGCGCCGTGGTGGTGTAAAGCGTATTTCTGGATTGATTTATGAAGAAAC 34145 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || |||| | || || ||| | |||||||||||||| || || || || Sbjct 34146 CCGAGGAGTACTGAAAGTGTTTCTAGAGAACATTATCCATGATGCTATCACTTACACTGA 34205 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || || || |||||||| || ||||||| | || ||||| | ||||| ||||| Sbjct 34206 ACATGCCAAGCGAAAGACTGTGACTGCCATGGACGTGGTGTATGCTCTAAAACGCCAAGG 34265 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | ||||| || || Sbjct 34266 TCGCACTCTCTATGGATTCGG 34286 >seq21001 Length=741 Score = 154 bits (170), Expect = 2e-33 Identities = 181/245 (74%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| ||||| | ||||| |||||||| ||||| || ||||| || ||||| Sbjct 154 CGCTAAGCGCCATCGGAAGGTACTTCGCGATAACATTCAAGGTATTACCAAACCGGCTAT 213 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| | |||||||||||||| |||||| || | ||||| ||| |||||||||||| Sbjct 214 TCGTCGTTTAGCTCGTCGTGGTGGTGTCAAGTGTATTTCTGGGTTGATCTATGAAGAGAC 273 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || | || | || || | | ||| |||| |||||| | ||||| || Sbjct 274 TCGTGGCGTGCTCAAAGTTTTTCTTGAAAACGTGATCCGCGATGCTGTTACTTATACGGA 333 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || || || |||||||| || ||||||| | || || || | ||||| || || Sbjct 334 ACATGCGAAGCGGAAGACTGTGACAGCCATGGACGTGGTTTACGCTCTAAAACGCCAGGG 393 Query 16672 CCGTA 16676 |||| Sbjct 394 TCGTA 398 >seq78581 Length=17267600 Score = 140 bits (154), Expect = 5e-29 Identities = 187/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||| | | |||| ||||| |||||||| || |||||||||||||| Sbjct 12310333 GCCAAGCGCCATCGTAAAGTGCTTCTGGATAATATCCAAGGTATTACCAAGCCAGCTATT 12310392 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| ||||||| || ||||| || |||| | | || || ||| |||| ||||||| Sbjct 12310393 CGTCGCTTGGCTCGACGCGGTGGGGTGAAGCATATTTCGGGGTTGATCTACGAAGAGACC 12310452 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | ||| | ||| ||| ||| ||||||| || || | || Sbjct 12310453 CGGGGAGTGCTGAAGGTGTTCTTGGAGAACGTGATCTGTGATGCTGTCACTTACGCTGAA 12310512 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || || || |||||||| | | |||||| | || ||||| |||| | || || Sbjct 12310513 CATGCCAAGCGAAAGACTGTAATGGCTATGGATGTGGTTTATGCCCTGAAGCACCAGGGT 12310572 Query 16673 CGTAAGATTTATGGTTTTGG 16692 |||| | ||||||||||| Sbjct 12310573 CGTACTCTCTATGGTTTTGG 12310592 >seq78522 Length=30564305 Score = 116 bits (128), Expect = 6e-22 Identities = 172/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATC-GCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| |||| | || | ||| | ||||||| ||||| || ||||| || |||| Sbjct 16779101 CGCTAAGCGCCATCAGAAGGTA-CTTTGCAATAACATTCAAGGTATTACCAAACCGGCTA 16779159 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | ||||| ||||||||| |||||| |||||| | | ||| ||| |||||||||||| Sbjct 16779160 TTTGTCGTTTGGCTCGTCTTGGTGGTGTCAAGTGCATTGGTGGGTTGATCTATGAAGAGA 16779219 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | || || || || | || ||| | | ||| |||| ||||| | || || | Sbjct 16779220 CCCATGGCGTGTTCAAAGTTTTTCTCGAAAACGTGATCCGCAATGCTGTTACTTACACTG 16779279 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | || || || || |||||||| || |||||||| | || || || | ||||| || | Sbjct 16779280 AACATGCGAAGCGGAAGACTGTGACAGCCATGGATGTGGTTTACGCTCTAAAACGCCAGG 16779339 Query 16671 G 16671 | Sbjct 16779340 G 16779340 >seq27142 Length=1041 Score = 114 bits (126), Expect = 2e-21 Identities = 171/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| || || || || || ||||| |||||| | ||||||||||| || || Sbjct 696 GACAACATCCAGGGCATTACAAAACCCGCTATTCGTCGTTTAGCTCGTCGTGGGGGCGTG 755 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||||| | || || | | || || |||| ||| | || |||||| |||| | || Sbjct 756 AAGCGCATTTCGGGTCTCATTTACGAGGAGACTCGGGGGGTGTTGAAGGTCTTTTTGGAG 815 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | || ||| ||||| | || |||||||| || || || |||||||| || || Sbjct 816 AATGTGATCAGAGATGCCGTTACTTACACCGAGCATGCGAAGCGGAAGACTGTGACTGCC 875 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| | || ||||| ||||| || || || |||| | || || |||||| | ||| Sbjct 876 ATGGACGTTGTTTATGCGTTGAAGCGCCAGGGTCGTACTCTCTACGGATTTGGAGGCTAA 935 Query 16700 TCT 16702 || Sbjct 936 CCT 938 >seq1533 Length=32216 Score = 104 bits (114), Expect = 4e-18 Identities = 155/221 (70%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| |||| | | ||| | |||||||||||||| || ||||||||||||| Sbjct 21726 GCCAAGCGCCATCATAAAGTGCTTTGGGATAACATCCAAGGTATTGCCAAGCCAGCTATT 21785 Query 16493 CGTCGTCTGGCTCGTCG--------TGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATG 16544 ||||| |||||| || ||| || || |||||| | || || ||| |||| | Sbjct 21786 CGTCGCTTGGCTCAACGCGGGGGTGTGGGGGTGTGAAGCGTATTTCAGGGTTGATCTACG 21845 Query 16545 AAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACT 16604 |||||| || | || ||||| | ||| | ||| | | |||||||||||| || | Sbjct 21846 AAGAGACCCGAGGAGTACTGAAGGTGTTCTTGGAGAACATGATCCATGATGCTGTCACTT 21905 Query 16605 ATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGAT 16645 | || || || | ||||| ||| |||| || | |||||| Sbjct 21906 ACACTGAACATGTCAAACGAAAGGCTGTAACAGCTATGGAT 21946 >seq78569 Length=9971662 Score = 100 bits (110), Expect = 4e-17 Identities = 168/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| || || | || || ||||| || ||| | ||||||||||| || || Sbjct 8751751 GACAACATCCAGGGTATTATAAAACCCGCTATTCGCCGTTTAGCTCGTCGTGGGGGCGTG 8751692 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||||| | || || | | || || |||| ||| | || ||||| |||| | || Sbjct 8751691 AAGCGCATTTCGGGTCTCATTTACGAGGAGACTCGGGGGGTGCTGAAGGTCTTTTTGGAG 8751632 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | || ||| ||||| | || |||||||| || || || |||||||| || || Sbjct 8751631 AATGTGATCAGAGATGCCGTTACTTACACCGAGCATGCGAAGCGGAAGACTGTGACTGCC 8751572 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| | || ||||| ||||| || || || |||| | || || |||||| | ||| Sbjct 8751571 ATGGACGTTGTTTATGCGTTGAAGCGCCAGGGTCGTACTCTCTACGGATTTGGAGGCTAA 8751512 Query 16700 TCT 16702 || Sbjct 8751511 CCT 8751509 >seq78583 Length=22294289 Score = 96.9 bits (106), Expect = 5e-16 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| |||||||| || || | ||||| || ||| |||| ||||||| | || || || Sbjct 18130152 AGACAACATCCAGGGCATTATGAAGCCGGCGATCAGTCGCTTGGCTCGCAGCGGCGGGGT 18130093 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAA 16578 ||| | ||| || || |||||||||||| || | || ||||| | ||||| | Sbjct 18130092 GAAGTGCATCTTGGGGCTGATCTATGAAGAGACCCGCGGGGTGCTGAAGGTTTTCCTGGA 18130033 Query 16579 GACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTC 16638 || ||| |||| ||||| | ||| ||||||||||| ||| | || || | || | Sbjct 18130032 GAACGTGATCCGCGATGCGGTGACCTACACCGAGCACGCCAAAAGGAAAACCATGACTGC 18129973 Query 16639 CATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||| | || || || ||||| | || || Sbjct 18129972 CATGGATGTGGTGTACGCCCTGAAATGCCAGGG 18129940 >seq78567 Length=3557767 Score = 96.9 bits (106), Expect = 5e-16 Identities = 169/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTC----- 16508 ||||| |||||||||||||| || | ||||||||||| ||| |||||| | Sbjct 482010 CTTCGGGATAACATCCAAGGTATTAGTAAGCCAGCTATTAGTCACTTGGCTCAACACGAG 482069 Query 16509 GTGGTGGAG-TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| | | |||||| | || || ||| |||| ||||||| ||| || ||||| Sbjct 482070 GGGGTGGGGGTGAAGCGTATTTCGGGGTTGATCTACGAAGAGACCTGTGGAGTGCTGAAG 482129 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | ||| | ||| | | ||| ||||| || || || || || || || ||| Sbjct 482130 GTGTTCTTAGAGAACATGATCTGCAATGCTGTCACTTACACTGAATGTGCCAAGCGAAAG 482189 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 ||||| | | | |||||| | || ||||| |||| || || || |||| | |||||| Sbjct 482190 ACTGTAAGCACTATGGATGTGGTTTATGCTCTGAAGCGCCAGGGTCGTACTCTCTATGGT 482249 Query 16688 TTTGG 16692 ||||| Sbjct 482250 TTTGG 482254 >seq8 Length=51558079 Score = 96.9 bits (106), Expect = 5e-16 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| | || || | | |||| | ||| |||||||| || || | ||||| || || Sbjct 23643510 GCTAAGAGGCACCGTA-AGGTCTTGCAAGACAACATCCAGGGTATTATGAAGCCGGCGAT 23643568 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| | ||||||| | |||| || |||| |||| || || |||| ||||||| Sbjct 23643569 CCGCCACTTGGCTCGCCACAGTGGGGTGAAGCACATCTCGGGGCTGATCTACGAAGAGAC 23643628 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || ||||| | ||||| ||| ||| ||| | ||| | ||||||||| Sbjct 23643629 CCGTGGGGTGCTGAAGGTTTTCCTGGAGAACGTGATCTGCGCTGCGGTGACCTATACCGA 23643688 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| || || ||||| || || | |||||| | || ||||| Sbjct 23643689 GCACGCCAAGCGGAAGACGGTGACGGCAATGGATGTGGTGTATGC 23643733 >seq78539 Length=2906080 Score = 80.6 bits (88), Expect = 4e-11 Identities = 106/147 (72%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||| | | |||| ||||||||||| || || |||||| ||||||| Sbjct 611565 GCCAAGCGCCATCGTAAAGTGCTTCAGGATAACATCCAGGGTATAACCAAGTCAGCTATT 611624 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| ||||||| | || | || |||||| | || || ||| |||| |||||| Sbjct 611625 CGTCGCTTGGCTCGAAGCGGGTGTGTGAAGCGTATTTCGGGGTTGATCTACAAAGAGACC 611684 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||| || ||||| | || ||||| Sbjct 611685 TGTGGAGTGCTGAAGGTGTTTGTCAAG 611711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79003340041335