Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq78565 129 5e-25
>seq78565
Length=14964121
Score = 129 bits (142), Expect = 5e-25
Identities = 173/240 (72%), Gaps = 3/240 (1%)
Strand=Plus/Plus
Query 22210 TTTGTAAAGA---TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAA 22266
|||||| ||| |||| || ||||| ||||| || || || ||||| |||| || |||
Sbjct 6183739 TTTGTACAGAAAATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTGGAA 6183798
Query 22267 GTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATT 22326
|| || ||| ||| ||| | || || |||| ||||| |||||||| || || |||
Sbjct 6183799 GTAGAGCCCAGCGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATT 6183858
Query 22327 CCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTC 22386
|| || || || || | || || |||||||| || ||| | || ||| |||||| |
Sbjct 6183859 CCTCCAGACCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTG 6183918
Query 22387 TCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| |||||||| || ||||||||||| | || || || |||| | || || |||
Sbjct 6183919 TCCGACTACAACATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCGCCTCCGAGGTGGT 6183978
Score = 127 bits (140), Expect = 2e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| ||||| || || || ||||| |||| || || || || ||| |
Sbjct 6184207 ATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTAGAGGTAGAGCCCAGC 6184266
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || ||||| ||||| |||||||| || || ||||| || || ||
Sbjct 6184267 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGACCAG 6184326
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || |||||||| || ||| | || ||| |||||| | ||||| ||||||
Sbjct 6184327 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 6184386
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| || ||||||||||| | || || || ||||
Sbjct 6184387 ATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCG 6184421
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| ||||| || || || ||||| |||| || ||||| || ||| |
Sbjct 6183979 ATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTAGAAGTAGAGCCCAGC 6184038
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| ||||| || ||||| || || ||||| || || ||
Sbjct 6184039 GACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCAGACCAG 6184098
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || |||||||| || ||| | || ||| |||||| | ||||| ||||||
Sbjct 6184099 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 6184158
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||||||||||| | || || || |||| | || || |||
Sbjct 6184159 ATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCGCCTCCGAGGTGGT 6184206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419325952386175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |