Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq78565 91.5 1e-13 >seq78565 Length=14964121 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 |||||||| || ||| | ||||| || |||||||||||||| ||| ||||| || || Sbjct 6183748 AAAATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTGGAAGTAGAGCCC 6183807 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 || || | | || | ||| ||||| || ||||| || | ||| | || Sbjct 6183808 AGCGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGAC 6183867 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||||| || |||||||| || || || || |||||| || || |||| ||| Sbjct 6183868 CAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTAC 6183927 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || ||||| ||||| ||||| || |||| | || | ||||| || Sbjct 6183928 AACATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCGCCTCCGAGGTGG 6183977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357781760647630