Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq78526 98.7 9e-16 >seq78526 Length=7101863 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| |||||| || | || ||||||||||| || || ||||| Sbjct 5468950 AGGCCTGTGACATGGGCAATCATATATGTGAGCAGTGAATAGCTGGCGATATTGAAAGGC 5469009 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| ||||||||||| || |||||||||| ||| || || || ||||| | Sbjct 5469010 ACCCCCAGTCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGA 5469069 Query 20357 ACATAAAATTGACA 20370 |||||||| || || Sbjct 5469070 ACATAAAACTGGCA 5469083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440939178809800