Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq39 118 1e-21
>seq39
Length=8077485
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293
||| || || | ||| || || || || |||||||| || | | |||||| | |||||
Sbjct 4823165 CACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGATAGGGTGCGGCCATCTTC 4823224
Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353
||||||||||| ||| | || |||| ||||||||| || || || |||||||| || ||
Sbjct 4823225 CAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCTTTGTCCTG 4823284
Query 64354 TATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413
|| || ||| ||| ||| | || |||| || || || |||| || | ||||||
Sbjct 4823285 GATCTTAGCCTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCTAGGGTGATGGTCTT 4823344
Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| |||| || || || || || |||||
Sbjct 4823345 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 4823374
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || || || || |||||||| || | | |||||| | |||
Sbjct 4823391 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 4823450
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || |||| ||||||||| || || || |||||||| ||
Sbjct 4823451 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCTTTGTCC 4823510
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || |||| || || || |||| || | ||||
Sbjct 4823511 TGGATCTTAGCCTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCTAGGGTGATGGTC 4823570
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||||| |||| || || || || || ||||| ||
Sbjct 4823571 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 4823605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499153930211800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |