Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq39 118 1e-21 >seq39 Length=8077485 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| || || | ||| || || || || |||||||| || | | |||||| | ||||| Sbjct 4823165 CACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGATAGGGTGCGGCCATCTTC 4823224 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 ||||||||||| ||| | || |||| ||||||||| || || || |||||||| || || Sbjct 4823225 CAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCTTTGTCCTG 4823284 Query 64354 TATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 || || ||| ||| ||| | || |||| || || || |||| || | |||||| Sbjct 4823285 GATCTTAGCCTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCTAGGGTGATGGTCTT 4823344 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| |||| || || || || || ||||| Sbjct 4823345 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 4823374 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | || || || || || |||||||| || | | |||||| | ||| Sbjct 4823391 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 4823450 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || |||| ||||||||| || || || |||||||| || Sbjct 4823451 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCTTTGTCC 4823510 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || |||| || || || |||| || | |||| Sbjct 4823511 TGGATCTTAGCCTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCTAGGGTGATGGTC 4823570 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| |||| || || || || || ||||| || Sbjct 4823571 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 4823605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499153930211800