Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_019522.1
Length=48454
Score E
Sequences producing significant alignments: (Bits) Value
seq8979 217 5e-52
>seq8979
Length=599
Score = 217 bits (240), Expect = 5e-52
Identities = 415/609 (68%), Gaps = 12/609 (2%)
Strand=Plus/Minus
Query 12921 ATTCGCGGGTTAGCGTGGGTGGTTCTGCGCTGGGCGCTGGCAACACGTCCGAAAGTGCTG 12980
||||| ||| | |||||| | | || ||||||| ||||| | || || ||
Sbjct 598 ATTCG-GGGCTGGCGTGGATTGAGCTTCGCTGGGGGCTGGAGGTAAAGCCACGCGTAATG 540
Query 12981 ATGATGGAGAACGTAGAGGAATTCCGGTCATGGGGGCCACT-CATGACACACAGCAACGG 13039
||| |||| ||||| | |||||| || ||||||| || || | || | | || |
Sbjct 539 ATGCTGGAAAACGTGGGCGAATTCAGGACATGGGGACCGCTGCTTGCCGG---GGAAATG 483
Query 13040 CGATCAATACCCAGACCCGAAACGCGCAGGGGAAACATTTGCCGCATTTGTTGGGATGCT 13099
|| ||| || || | ||| | || ||||| |||| |||||||| || ||| |
Sbjct 482 CG-------CCCTGATCCTGAGCGCACCGGAGAAACCTTTGAAGCATTTGTAGGAATGTT 430
Query 13100 GAGTGTAGGCGTACCAAAGGATCACCCCGCGCTGGCTGAAGCCTGCGAGTTTTTGAACAT 13159
| | || | || | |||| || |||||||| ||| ||||||||| || | ||
Sbjct 429 AACTACGGGTATTCCGGCGAATCATCCGGCGCTGGCGGAATGTTGCGAGTTTCTGGAAAT 370
Query 13160 CAGCACAGACAGCGACGATGCCACCAGACTGGTTAATGGACTCGGTTACAACGTTGATCA 13219
| | |||| || | || | | ||||| || || || || || | |||||| |
Sbjct 369 CGATATTCACAGTGAGCAGGCAAAGCGGCTGGTCAACGGTCTGGGGTATACCGTTGAATA 310
Query 13220 TCGTGAGTTGAAAGCCAGCGATTACGGTACGCCGACAATCAGAAAGCGGTTGTTCGTTGT 13279
|| || || ||| | ||||| || ||||||| || | |||||||| ||| | ||
Sbjct 309 CCGGGAATTACGCGCCTGTGATTATGGCGCGCCGACCATTCGTAAGCGGTTCTTCATGGT 250
Query 13280 CGCTCGTTGTGATGGGCATCCTGTTGAATGGCCGGAGGCTACACACGGCGATCCTAAATC 13339
|| ||||| || || || || |||| ||||||||| | || ||||||||||| |||||
Sbjct 249 GGCACGTTGCGACGGTCAGCCGGTTGTATGGCCGGAACCAACCCACGGCGATCCGAAATC 190
Query 13340 ACCCGCAGTTCAAGCCGGTAAATTAGAGCCGTGGCGCACAGCTGCTGAGTGTATTGATTG 13399
| || | || | ||| | |||| ||| | || || || || || ||||| ||
Sbjct 189 AGAAGCGATGAAATCGGGTCGCCTGAAGCCCTGGAGAACGGCGGCAGAATGCATTGACTG 130
Query 13400 GTCGATCCCTTGCCCGTCTATTTTCGAGCGCAAAAAGCCTTTGGCCGAAAACACACTGCG 13459
||| || || ||||| ||||||| |||||||||||| |||| ||||| || |
Sbjct 129 GTCAATTCCGGCACCGTCAATTTTCGGGCGCAAAAAGCCGCTGGCTGAAAATACCTTAAA 70
Query 13460 ACGCATCGCGCGTGGGCTGGAGCGGTTTGTTATCAATAATCCGCAGCCGTTTATCGTTAA 13519
|||||||||||||| | |||| ||||||||||| | | || |||||||||||| ||
Sbjct 69 GCGCATCGCGCGTGGCATACAGCGATTTGTTATCAACAGTGCGTCGCCGTTTATCGTGAA 10
Query 13520 GTGTAACCA 13528
||| |||||
Sbjct 9 GTGCAACCA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154786600290240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |