Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq8979 217 5e-52 >seq8979 Length=599 Score = 217 bits (240), Expect = 5e-52 Identities = 415/609 (68%), Gaps = 12/609 (2%) Strand=Plus/Minus Query 12921 ATTCGCGGGTTAGCGTGGGTGGTTCTGCGCTGGGCGCTGGCAACACGTCCGAAAGTGCTG 12980 ||||| ||| | |||||| | | || ||||||| ||||| | || || || Sbjct 598 ATTCG-GGGCTGGCGTGGATTGAGCTTCGCTGGGGGCTGGAGGTAAAGCCACGCGTAATG 540 Query 12981 ATGATGGAGAACGTAGAGGAATTCCGGTCATGGGGGCCACT-CATGACACACAGCAACGG 13039 ||| |||| ||||| | |||||| || ||||||| || || | || | | || | Sbjct 539 ATGCTGGAAAACGTGGGCGAATTCAGGACATGGGGACCGCTGCTTGCCGG---GGAAATG 483 Query 13040 CGATCAATACCCAGACCCGAAACGCGCAGGGGAAACATTTGCCGCATTTGTTGGGATGCT 13099 || ||| || || | ||| | || ||||| |||| |||||||| || ||| | Sbjct 482 CG-------CCCTGATCCTGAGCGCACCGGAGAAACCTTTGAAGCATTTGTAGGAATGTT 430 Query 13100 GAGTGTAGGCGTACCAAAGGATCACCCCGCGCTGGCTGAAGCCTGCGAGTTTTTGAACAT 13159 | | || | || | |||| || |||||||| ||| ||||||||| || | || Sbjct 429 AACTACGGGTATTCCGGCGAATCATCCGGCGCTGGCGGAATGTTGCGAGTTTCTGGAAAT 370 Query 13160 CAGCACAGACAGCGACGATGCCACCAGACTGGTTAATGGACTCGGTTACAACGTTGATCA 13219 | | |||| || | || | | ||||| || || || || || | |||||| | Sbjct 369 CGATATTCACAGTGAGCAGGCAAAGCGGCTGGTCAACGGTCTGGGGTATACCGTTGAATA 310 Query 13220 TCGTGAGTTGAAAGCCAGCGATTACGGTACGCCGACAATCAGAAAGCGGTTGTTCGTTGT 13279 || || || ||| | ||||| || ||||||| || | |||||||| ||| | || Sbjct 309 CCGGGAATTACGCGCCTGTGATTATGGCGCGCCGACCATTCGTAAGCGGTTCTTCATGGT 250 Query 13280 CGCTCGTTGTGATGGGCATCCTGTTGAATGGCCGGAGGCTACACACGGCGATCCTAAATC 13339 || ||||| || || || || |||| ||||||||| | || ||||||||||| ||||| Sbjct 249 GGCACGTTGCGACGGTCAGCCGGTTGTATGGCCGGAACCAACCCACGGCGATCCGAAATC 190 Query 13340 ACCCGCAGTTCAAGCCGGTAAATTAGAGCCGTGGCGCACAGCTGCTGAGTGTATTGATTG 13399 | || | || | ||| | |||| ||| | || || || || || ||||| || Sbjct 189 AGAAGCGATGAAATCGGGTCGCCTGAAGCCCTGGAGAACGGCGGCAGAATGCATTGACTG 130 Query 13400 GTCGATCCCTTGCCCGTCTATTTTCGAGCGCAAAAAGCCTTTGGCCGAAAACACACTGCG 13459 ||| || || ||||| ||||||| |||||||||||| |||| ||||| || | Sbjct 129 GTCAATTCCGGCACCGTCAATTTTCGGGCGCAAAAAGCCGCTGGCTGAAAATACCTTAAA 70 Query 13460 ACGCATCGCGCGTGGGCTGGAGCGGTTTGTTATCAATAATCCGCAGCCGTTTATCGTTAA 13519 |||||||||||||| | |||| ||||||||||| | | || |||||||||||| || Sbjct 69 GCGCATCGCGCGTGGCATACAGCGATTTGTTATCAACAGTGCGTCGCCGTTTATCGTGAA 10 Query 13520 GTGTAACCA 13528 ||| ||||| Sbjct 9 GTGCAACCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154786600290240