Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq26 260 2e-64 seq78578 228 1e-54 seq39 179 5e-40 seq78565 161 1e-34 seq2 116 5e-21 seq120 104 3e-17 seq40 95.1 2e-14 seq96 84.2 3e-11 >seq26 Length=11608308 Score = 260 bits (288), Expect = 2e-64 Identities = 1021/1589 (64%), Gaps = 41/1589 (3%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 |||||||| ||||| | || || || ||||| || || ||||| | ||| | | Sbjct 9935191 GCTATTGGCATCGACCTGGGCACCACGTACTCCTGCGTGGGTGTCTTTCAACACGGCAAG 9935250 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | || ||||| || ||||| || || || || || ||||| || Sbjct 9935251 GTCGAGATCATCGCCAACGACCAGGGCAACCGCACCACGCCCAGCTATGTGGCCTTCACC 9935310 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || ||| | || || ||||| || || ||| || |||||||| | ||| Sbjct 9935311 GACACCGAGCGCCTCATCGGGGACGCCGCCAAGAACCAGGTCGCCATGAACCCCACCAAC 9935370 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||| ||||| ||||| || || || || |||| || | | || || | Sbjct 9935371 ACCATCTTCGACGCCAAGCGCCTCATCGGCCGGAAGTACGATGACACCACGGTGCAGTCC 9935430 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTATGATTAA 195597 || || ||| ||||| | | || || || | | ||| ||||| | | | | Sbjct 9935431 GACATGAAGCACTGGCCCTTCCGCGTGGTGAGCGAGGGCGGC----AAGCCCAAGGTGGA 9935486 Query 195598 TGTTGAATTTCACGGTGAGAAGAA-ACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656 || || | | || ||||| || || | | | ||||| || || || |||||| Sbjct 9935487 GGTGGAGTACAAGGGCGAGAACAAGACCTTCTTC-CCCGAGGAGATCAGCTCCATGGTGC 9935545 Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 | | ||||||||||||| ||||| | | | |||| | ||| | | || || Sbjct 9935546 TCACCAAGATGAAGGAGATCGCGGAGGCCTACCTGGGCCGCAAGGTGCAGAACGCCGTCA 9935605 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 | || || || || ||||||| || || || || ||||| || || ||||| | | | Sbjct 9935606 TCACCGTGCCCGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAAGACGCCGGCACCA 9935665 Query 195777 TTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | | || || ||| || | || ||||| || || || ||||| || || || || | Sbjct 9935666 TCACCGGCCTCAACGTGCTCCGTATCATCAACGAGCCCACGGCGGCCGCCATCGCCTACG 9935725 Query 195837 GTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | ||||||||||| | || || || || || || | ||||| || | || | Sbjct 9935726 GGCTGGACAAGAAAGGCACCGGGGCCGGCGAGAAGAACGTGCTCATCTTCGACTTGGGCG 9935785 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 | || || || || ||||| | |||| || || | || || ||||| || ||| | | Sbjct 9935786 GCGGCACCTTCGACGTCTCCATCCTCACCATCGAGGACGGCATCTTCGAGGTGAAGTCCA 9935845 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || || || || || || || || || || || || || | | | || || Sbjct 9935846 CAGCCGGCGACACCCACCTGGGCGGCGAGGACTTTGACAACCGCATGGTGAGCCACTTCG 9935905 Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 || |||||| || ||| | ||| || || | || |||| | || | Sbjct 9935906 TGGAGGAGTTCAAGCGCAAGCACAAGCGGGACATCGGCAGCAACAAGCGGGCGGTGCGGC 9935965 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCT---CTCTTCTAC---GGCTCAAA 196124 |||| | ||||| || || || ||||| || || || ||| || || |||| | Sbjct 9935966 GGCTGCGCACTGCCTGCGAGCGGGCCAAGCGCACGCTGAGCTCCTCCACCCAGGCT--AG 9936023 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTG 196184 || | ||||| || ||| |||| || || || |||||||| || | || ||||| | Sbjct 9936024 CA----TCGAGATCGACTCGCTGTTCGAGGGCATCGACTTCTACACTTCCATCACCCGCG 9936079 Query 196185 CACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAG 196244 | || || || ||| | ||| | || | || | |||| || || || | | Sbjct 9936080 CCCGCTTCGAGGAGCTCAACGCCGACCTCTTCCGCGGCACCTTGGAGCCCGTGGAGAAGG 9936139 Query 196245 TACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGAT 196304 || || || || ||| | || ||| || | | || || || || ||||| || | Sbjct 9936140 CCCTGCGCGATGCCAAGCTAGACAAGGGCCAGATCCAGGAGATCGTGCTGGTGGGCGGCT 9936199 Query 196305 CAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTA 196363 | ||||| || || ||||| ||| || | ||| | | ||| ||||| || || | Sbjct 9936200 CCACCCGCATCCCCAAGATCCAAAAGCT-CTTGCAGGACTTTTTCAACGGCAAGGAGCTC 9936258 Query 196364 AACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATT 196423 ||||| | |||||||| || || || || |||||||| || || || |||||||| || Sbjct 9936259 AACAAGAGCATCAACCCCGACGAGGCCGTAGCTTATGGCGCCGCAGTGCAGGCTGCCATC 9936318 Query 196424 CTCTCAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCC 196480 ||| || | |||| | | ||||| || ||| | ||||| || ||||| | || Sbjct 9936319 CTCATGGGGG---ACAAGTCTGAGAACGTGCAGGATTTGCTGCTGCTCGATGTCACTCCT 9936375 Query 196481 GTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACA 196540 | ||| |||| | || ||||| || || || ||||| | || | | ||||| Sbjct 9936376 CTGTCCTTGGGCATCGAGACAGCCGGCGGGGTGATGACCGCCCTCATCAAGCGTAACACC 9936435 Query 196541 ACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGT 196599 || || || || ||| || || |||| | || || ||||| || || | ||| || Sbjct 9936436 ACCATCCCCACCAAGCAGACCCAGATCTTCACCACCTACTCCGACAACCAGAACAGC-GT 9936494 Query 196600 TCATATTCAAGTATATGAAGG--AGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGG 196656 | | || || || || || ||| ||| || | ||||| ||| |||| || || Sbjct 9936495 CCTGGTGCAGGTGTACGAGGGCGAGAGGGCTA---TGACGAAGGACAACAATCTGCTGGG 9936551 Query 196657 AACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTG 196716 | ||||| ||||| || || || | || ||| | || || || ||||| | || Sbjct 9936552 CAAGTTCGACTTGACTGGCATCCCCCCAGCTCCCCGCGGGGTCCCCCAGATCGAGGTCAC 9936611 Query 196717 CTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAA 196776 ||||||||||||||| || || || || || ||||| || |||||| | || || Sbjct 9936612 CTTCGATATAGACGCCAACGGTATCCTGAATGTCACTGCCTCCGACAAGAGCACGGGTAA 9936671 Query 196777 ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACG 196836 | | ||||| || ||||| |||||||| || || ||||| || ||||| || Sbjct 9936672 AGAGAACAAGATCACCATCACCAACGACAAGGGCCGCCTCAGCAAGGATGACATTGACCG 9936731 Query 196837 TATGGTTCAAGATGCGGAAAAGTACAGGG 196865 ||||| || || || || ||||||| || Sbjct 9936732 AATGGTGCAGGACGCAGAGAAGTACAAGG 9936760 >seq78578 Length=5143557 Score = 228 bits (252), Expect = 1e-54 Identities = 374/539 (69%), Gaps = 0/539 (0%) Strand=Plus/Minus Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 ||||| | |||||||| || |||||||| || |||||||| || | |||| |||||| Sbjct 2805048 AATGTCCTTATCTTTGACCTTGGTGGTGGCACTTTTGATGTTTCGATCCTCACTATTGAG 2804989 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 | ||| || || ||||||||| | ||||| |||||||| || | ||||| || || || Sbjct 2804988 GATGGCATCTTTGAAGTAAAGTCAACTGCAGGTGATACCCACTTGGGTGGGGAGGACTTT 2804929 Query 195986 GATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATT 196045 ||| ||| | || ||||| || ||| ||| || ||| | ||||| || ||| Sbjct 2804928 GATAACCGTATGGTCAACCATTTCATTGCTGAATTCAAGCGTAAGCACAAGAAGGACATT 2804869 Query 196046 TCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACT 196105 ||| || || || |||| || || | ||||| ||||||||||| || || || Sbjct 2804868 ACTGAGAACAAGAGAGCAGTTCGCCGTCTCCGCACTGCTTGTGAACGTGCAAAGCGTACC 2804809 Query 196106 CTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTC 196165 ||||| |||| |||| | | |||||||||| || | | ||| || ||||| || Sbjct 2804808 CTCTCCTCTAGCACTCAGGCCAGTATTGAGATTGACTCTCTCTATGAGGGCATTGATTTT 2804749 Query 196166 TATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGT 196225 || || | |||||| | || ||||||||||||||||| ||||| |||| | | Sbjct 2804748 TACACCTCAATTACCAGAGCTCGTTTTGAAGAGTTAAATGCTGATCTGTTCCGTGGCACT 2804689 Query 196226 ATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAA 196285 |||| || || || | | || || || || || | || || || || | |||| Sbjct 2804688 CTGGATCCCGTGGAGAAGGCCCTGCGGGATGCCAAACTAGACAAATCACAGATCCATGAT 2804629 Query 196286 ATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTC 196345 ||||| || || || || || ||||| || || |||||||| | |||| ||| Sbjct 2804628 ATTGTACTGGTTGGTGGGTCTACCCGAATCCCCAAGATTCAGAAACTGCTGCAGGATTTC 2804569 Query 196346 TTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404 |||||| ||||| | || || | ||||| || |||||||| || ||||||||||| Sbjct 2804568 TTCAATGGCAAAGAGCTGAATAAGAGCATCAATCCTGATGAAGCTGTGGCTTATGGTGC 2804510 Score = 116 bits (128), Expect = 5e-21 Identities = 113/143 (79%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || || || ||||| || ||||||| ||| || || || ||||| ||||| || | Sbjct 2805320 ATGCTGTGGTCACAGTACCAGCCTACTTCAATGACTCCCAGCGCCAGGCCACAAAAGATG 2805261 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCA 195826 ||| | ||||| ||||| || ||| || | || ||||||||||| ||||| ||||| Sbjct 2805260 CTGGAACCATTGCAGGTCTCAA-TGTGCTCCGGATCATCAATGAACCGACAGCTGCTGCT 2805202 Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849 |||||||||||| |||||||||| Sbjct 2805201 ATTGCTTATGGTTTGGACAAGAA 2805179 >seq39 Length=8077485 Score = 179 bits (198), Expect = 5e-40 Identities = 179/232 (77%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||||||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 4823379 GTGGTATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTAGAGGTTGAGC 4823320 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| || || || |||| || ||||| || || || |||||||| ||||| | Sbjct 4823319 CCAGTGACACTATTGAGAATGTCAAGGCTAAGATCCAGGACAAAGAAGGCATCCCACCTG 4823260 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| | || || |||||||| || ||||| |||||||| || ||||| |||| | Sbjct 4823259 ACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTATCTGACT 4823200 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||||| || || |||||||| | | || ||||||| Sbjct 4823199 ACAACATCCAGAAGGAGTCCACGCTCCACCTTGTGTTGCGTCTGAGGGGTGG 4823148 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || |||||||| ||||||||| | Sbjct 4823602 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTAGAGGTTGAGCCCAGT 4823543 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| || ||||| || || || |||||||| ||||| || ||| Sbjct 4823542 GACACTATTGAGAATGTCAAGGCTAAGATCCAGGACAAAGAAGGCATCCCACCTGACCAG 4823483 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| |||||||| || ||||| |||| |||||| Sbjct 4823482 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 4823423 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || |||||||| || | || | |||||| Sbjct 4823422 ATCCAGAAGGAGTCCACCCTCCACCTTGTGCTGCGTCTGAGAGGTGGT 4823375 >seq78565 Length=14964121 Score = 161 bits (178), Expect = 1e-34 Identities = 166/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||||||||||||| | || || ||||| |||||||| ||||| ||| Sbjct 6184202 GTGGTATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTAGAGGTAGAGC 6184261 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| || || || |||||||||| || ||||| || ||||||||||| || | Sbjct 6184262 CCAGCGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAG 6184321 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| | || || ||||| || || ||||| |||||||| || ||||| | || | Sbjct 6184322 ACCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACT 6184381 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||| | || || || || ||||| ||| | || || Sbjct 6184382 ACAACATCCAGAAAGAATCCACTCTGCACTTGGTCCT 6184418 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||||||| | || || ||||| |||||||| || || ||| | Sbjct 6183751 ATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTGGAAGTAGAGCCCAGC 6183810 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| ||||| || ||||| || ||||||||||| || || ||| Sbjct 6183811 GACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGACCAG 6183870 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| |||||||| || ||||| | || |||||| Sbjct 6183871 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 6183930 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || || || || ||||| ||| | || || | || || |||||| Sbjct 6183931 ATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCGCCTCCGAGGTGGT 6183978 Score = 154 bits (170), Expect = 2e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||||||||||||| | || || ||||| |||||||| || || ||| Sbjct 6183974 GTGGTATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTAGAAGTAGAGC 6184033 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| || || || |||| ||||| || || || || ||||||||||| || | Sbjct 6184034 CCAGCGACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCAG 6184093 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| | || || ||||| || || ||||| |||||||| || ||||| | || | Sbjct 6184094 ACCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACT 6184153 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || || || || ||||| ||| | || || | || || |||||| Sbjct 6184154 ACAACATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCGCCTCCGAGGTGGT 6184206 >seq2 Length=68452538 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 ||||| ||||| || || ||||| |||||||| ||||||||| | || || || || || Sbjct 8820570 GTGAAGACCCTGACCGGGAAAACCATCACCCTTGAGGTTGAGCCTTCTGATACTATAGAA 8820629 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 || | || |||||||| || ||||||||||| ||||| || ||||||||| |||||||| Sbjct 8820630 AATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAATGACTTATT 8820689 Query 171994 TTTG 171997 | || Sbjct 8820690 TATG 8820693 >seq120 Length=3203753 Score = 104 bits (114), Expect = 3e-17 Identities = 159/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 |||||||||||||| || || ||||| |||||||| || || || |||| || | ||| Sbjct 1036735 AAGGATAACCATCTTCTGGGTACTTTTGATTTGACTGGAATCCCTCCTGCTCCTCGTGGT 1036676 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 || |||||||| | ||| ||| || ||||| | |||||||| || || ||||| Sbjct 1036675 GTCCCACAGATCGAAGTTACCTTTGAGATAGATGTGAATGGAATCCTCCGTGTTACAGCG 1036616 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAA-AAGATTGTGATTACCAATGACAAGGGGCGGCT 196815 || ||||||| | || |||| || ||||| ||||| |||||| || || || Sbjct 1036615 GAAGACAAGGGCACAGG-AAATAAAAACAAGATCACAATTACGAATGACCAGAACCGTCT 1036557 Query 196816 TTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGT 196859 | ||||| ||||| | |||||| | ||||| || |||| Sbjct 1036556 GACACCAGAGGAGATTGAGAGGATGGTTAATGATGCTGAGAAGT 1036513 >seq40 Length=7497131 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| ||||| || ||||| |||||||||||||||||||| || ||| | ||||||||||| Sbjct 7303601 AGGAATTCCTCCTGATCAACAACGACTTATTTTTGCTGGCAAGCAGTTGGAAGATGGACG 7303542 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTA 172057 || || |||| ||||| ||||||||| || || Sbjct 7303541 CACGCTGTCTGACTACAATATTCAAAAGGTGTGTA 7303507 >seq96 Length=4257890 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||||||||| || || ||||| |||||| | ||||| ||| | Sbjct 2450302 ATGCAGATCTTCGTGAAAACCCTGACGGGCAAAACCATCACCTTGGAGGTGGAGCCCAGC 2450243 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || |||| |||||||| || || ||||| || Sbjct 2450242 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGG 2450199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657216091308400