Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq8979 87.8 6e-13 >seq8979 Length=599 Score = 87.8 bits (96), Expect = 6e-13 Identities = 146/208 (70%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 42017 CGGGAATTGCGCGCATGCGATTACGGCGCACCGACGATCCGCAAGCGCCTTTTCGTCATC 42076 |||||||| ||||| || ||||| ||||| ||||| || || ||||| | ||| | | Sbjct 308 CGGGAATTACGCGCCTGTGATTATGGCGCGCCGACCATTCGTAAGCGGTTCTTCATGGTG 249 Query 42077 ATCCGTTTTGATGGTCAAAAGATCGTCTGGCCGGAACCGACGCACGGCGCGCCCGA---T 42133 |||| || ||||| | | || ||||||||||| || ||||||| || | Sbjct 248 GCACGTTGCGACGGTCAGCCGGTTGTATGGCCGGAACCAACCCACGGCGATCCGAAATCA 189 Query 42134 GATGCCGACGTGATCGCCGGTCGCAAGCTACCGTGGCGCACTGCGGCAGAATGCATCGAC 42193 || | ||| | |||| |||||| | || ||| | || |||||||||||||| ||| Sbjct 188 GAAG-CGATGAAATCG--GGTCGCCTGAAGCCCTGGAGAACGGCGGCAGAATGCATTGAC 132 Query 42194 TGGTCGATCCCATGCCCGTCGATCTTCG 42221 ||||| || || ||||| || |||| Sbjct 131 TGGTCAATTCCGGCACCGTCAATTTTCG 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169646318526960