Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq78565 91.5 1e-13
>seq78565
Length=14964121
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|||||||| || ||||| ||||| || || ||||||||||| ||| | ||| |||||
Sbjct 6183748 AAAATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTGGAAGTAGAGCCC 6183807
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| || | | | || || || || |||||||||||| | || ||
Sbjct 6183808 AGCGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGAC 6183867
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || || || || | ||| || || |||||||| |||| | || || | || |||
Sbjct 6183868 CAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTAC 6183927
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || |||||||| || ||||| |||| | | || ||||| ||
Sbjct 6183928 AACATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCGCCTCCGAGGTGG 6183977
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || ||||| ||||| || || ||||||||||| ||| | ||| ||||| |
Sbjct 6183979 ATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTAGAAGTAGAGCCCAGC 6184038
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | || || || || |||||||||||| | || || ||
Sbjct 6184039 GACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCAGACCAG 6184098
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || || | ||| || || |||||||| |||| | || || | || ||||||
Sbjct 6184099 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 6184158
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || |||||||| || ||||| |||| | | || ||||| ||
Sbjct 6184159 ATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCGCCTCCGAGGTGG 6184205
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || ||||| ||||| || || ||||||||||| ||| | || ||||| |
Sbjct 6184207 ATGCAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTAGAGGTAGAGCCCAGC 6184266
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | || ||| || || |||||||||||| | || || ||
Sbjct 6184267 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGACCAG 6184326
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || || | ||| || || |||||||| |||| | || || | || ||||||
Sbjct 6184327 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 6184386
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
|| || |||||||| || ||||| ||||
Sbjct 6184387 ATCCAGAAAGAATCCACTCTGCACTTGGT 6184415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412446148707335
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |