Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq78532 93.3 4e-14 >seq78532 Length=2584813 Score = 93.3 bits (102), Expect = 4e-14 Identities = 126/173 (73%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 21124 TAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCC 21183 |||||||||||| || | || |||||| | ||| | |||||| |||| | ||| |||| Sbjct 2502544 TAGCATTTGGGGACCAACATGTGATGGCCTGGATCGTATTGTTGAGCGCTTTGATATGCC 2502603 Query 21184 AGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAG 21243 |||| | ||||| || || ||| | |||||||||| ||||| || |||| | | ||| Sbjct 2502604 AGAGTTGCAAGTTGGTGATTGGATGCTATTTGAAAATATGGGTGCCTACACAGTTG-CAG 2502662 Query 21244 CT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 || |||| || || || || |||| ||||| || | ||||| || ||| Sbjct 2502663 CTGCTTCCACTTTCAATGGATTCCAGCGGCCAGCAATAAATTATGTGATGTCA 2502715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463090195419600