Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 2e-20
>seq3
Length=75876001
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428
|||||| | || ||||||||||||| | | || ||||| || || ||||| || ||| |
Sbjct 66048342 GATAGCTGGTGCTTTATGGTGGTACTTTGTCTCAAAAGGAATTGAGTACTTGGACACAAT 66048401
Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488
|||||||| | ||||| || ||||| || | || || || || || ||||| |||||
Sbjct 66048402 ATTTTTCATCTTGAGGAAGAAATTTAACCAAATCAGTTTCCTTCATGTCTATCACCATTT 66048461
Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
|||||||| || || | ||| | ||||| || ||| || ||||||| ||
Sbjct 66048462 CACTATGTTCACCTTGTGGTGGATTGGTATCAAGTGGGTTCCAGGAGGACA 66048512
Score = 89.7 bits (98), Expect = 9e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600
|| ||||| || || || ||||||||||||| |||||| ||||||| | || |||||
Sbjct 66054388 GCTTTTTTTGGAGCCCAAATGAATTCTTTTATTCATGTTGTTATGTACATGTACTATGGA 66054447
Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660
| || || ||||| | || ||| | || ||| | |||||||| || ||| | || |||
Sbjct 66054448 TTAGCTGCCTGTGGCCCTAAATTTCAGAAATATCTGTGGTGGAAACGATACTTGACCATA 66054507
Query 58661 ATGCAATTGGTA 58672
| |||||||||
Sbjct 66054508 TTACAATTGGTA 66054519
Score = 86.0 bits (94), Expect = 1e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 58673 CAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTTTCCA 58732
|| ||||| | || | || || || || ||||| ||||| || || || || || ||
Sbjct 66056703 CAGTTCCACGTGACTCTTGGCCACACAGCCATGTCTATTTATATCGACTGTCCCTTCCCT 66056762
Query 58733 AAATGGACGCAATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGGTAAC 58792
||||||| ||| ||| || || |||||| | || || ||||| || ||||||||||||
Sbjct 66056763 AAATGGATGCACTGGGGTGTAATGATCTATGCCATCACCTTTATTTTCTTGTTTGGTAAC 66056822
Query 58793 TTCTATTTTAGAACATACAA 58812
||||| | | | ||||| ||
Sbjct 66056823 TTCTACTATCGGACATATAA 66056842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902523654959200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |