Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq156 109 7e-19 seq78529 107 3e-18 seq78565 105 9e-18 seq76458 105 9e-18 seq32725 105 9e-18 seq2285 100 4e-16 seq925 100 4e-16 seq36374 93.3 6e-14 seq78530 89.7 7e-13 seq78548 87.8 2e-12 seq16958 87.8 2e-12 seq1106 87.8 2e-12 seq81 84.2 3e-11 seq6 82.4 1e-10 >seq156 Length=2469232 Score = 109 bits (120), Expect = 7e-19 Identities = 72/80 (90%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 8650 TGCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGG 8709 |||| | |||||||||||||||||||| ||||| |||| ||||| ||| ||||||||||| Sbjct 2368982 TGCCCTTTTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACACAGGAGACCGGGG 2369041 Query 8710 TTCGATTCCCCGACGAGGAG 8729 ||||||||||||||| |||| Sbjct 2369042 TTCGATTCCCCGACGGGGAG 2369061 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| ||| ||||||||||||||||||| Sbjct 2368990 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACACAGGAGACCGGGGTTCGATTC 2369049 Query 11789 CCCGACGAGGAGGG 11802 ||||||| |||||| Sbjct 2369050 CCCGACGGGGAGGG 2369063 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||| ||| |||| |||||||| | ||||||| Sbjct 2369061 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCTGTGTGACAGGCGGGGATACTCACCACTA 2369002 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2369001 TACTAACGAGGA 2368990 >seq78529 Length=6346059 Score = 107 bits (118), Expect = 3e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 ||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| || Sbjct 3554627 ATTCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 3554686 Query 8716 TCCCCGACGAGGAG 8729 ||||||||| |||| Sbjct 3554687 TCCCCGACGGGGAG 3554700 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1850321 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1850380 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1850381 CCCGACGGGGAG 1850392 Score = 104 bits (114), Expect = 3e-17 Identities = 75/84 (89%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 11720 TGTAACCCAG-TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCG 11777 ||| || ||| |||||||||||||||||||| |||| |||| ||||| | |||||||||| Sbjct 3554961 TGTCACGCAGCTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCG 3554902 Query 11778 GGGTTCGATTCCCCGACGAGGAGG 11801 |||||||||||||||||| ||||| Sbjct 3554901 GGGTTCGATTCCCCGACGGGGAGG 3554878 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 3554950 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3554891 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 3554890 CCCGACGGGGAG 3554879 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 1850321 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1850380 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 1850381 CCCGACGGGGAGG 1850393 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1850392 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1850333 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 1850332 TACTAACGAGGAT 1850320 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 3554629 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 3554688 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 3554689 CCCGACGGGGAGG 3554701 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 3554700 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 3554641 Query 139413 TACTAACGAGGATTT 139427 |||||||||||| || Sbjct 3554640 TACTAACGAGGAATT 3554626 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 3554879 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 3554938 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 3554939 TACTAACGAGGA 3554950 >seq78565 Length=14964121 Score = 105 bits (116), Expect = 9e-18 Identities = 69/75 (92%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||| Sbjct 6176800 AGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 6176859 Query 11787 TCCCCGACGAGGAGG 11801 ||||||||| ||||| Sbjct 6176860 TCCCCGACGGGGAGG 6176874 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 6172443 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 6172502 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 6172503 CCCGACGGGGAG 6172514 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 6176799 TAGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 6176858 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 6176859 TTCCCCGACGGGGAG 6176873 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 6172443 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 6172502 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 6172503 CCCGACGGGGAGG 6172515 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 6172514 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 6172455 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 6172454 TACTAACGAGGAT 6172442 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 6176873 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 6176814 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 6176813 TACTAACGAGGA 6176802 >seq76458 Length=506 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 114 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 173 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 174 CCCCGACGGGGAG 186 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 115 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 174 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 175 CCCGACGGGGAG 186 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 187 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 128 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 127 ATACTAACGAGGA 115 >seq32725 Length=905 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 392 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 333 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 332 CCCCGACGGGGAG 320 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 391 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 332 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 331 CCCGACGGGGAG 320 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 319 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 378 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 379 ATACTAACGAGGA 391 >seq2285 Length=18801 Score = 100 bits (110), Expect = 4e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | | |||||||||||||||||| Sbjct 18715 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCAGGAGACCGGGGTTCGATT 18656 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 18655 CCCCGACGGGGAG 18643 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | | ||||||||||||||||||| Sbjct 18714 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCAGGAGACCGGGGTTCGATTC 18655 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 18654 CCCGACGGGGAG 18643 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||| | | |||| |||||||| | |||||| Sbjct 18642 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCTGCGTGACAGGCGGGGATACTCACCACT 18701 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 18702 ATACTAACGAGGA 18714 >seq925 Length=74835 Score = 100 bits (110), Expect = 4e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||||| Sbjct 60679 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCAAGCGGGAGACCGGGGTTCGATT 60738 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 60739 CCCCGACGGGGAG 60751 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||| Sbjct 60680 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCAAGCGGGAGACCGGGGTTCGATTC 60739 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 60740 CCCGACGGGGAGG 60752 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| |||| |||||||| | ||||||| Sbjct 60751 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCTTGACAGGCGGGGATACTCACCACTA 60692 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 60691 TACTAACGAGGA 60680 >seq36374 Length=840 Score = 93.3 bits (102), Expect = 6e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| |||| ||||| | ||||||||| |||||||||| Sbjct 189 TTCCTCGTTAGTATAGTGGGGAGTATCCCCGCCTGTCACGCGGGAGACCAGGGTTCGATT 248 Query 8717 CCCCGACGAGGAGCAGAG 8734 ||| |||| |||| |||| Sbjct 249 CCCTGACGGGGAG-AGAG 265 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| |||| ||||| | ||||||||| ||||||||||| Sbjct 190 TCCTCGTTAGTATAGTGGGGAGTATCCCCGCCTGTCACGCGGGAGACCAGGGTTCGATTC 249 Query 11789 CCCGACGAGGAGGGAG 11804 || |||| |||| ||| Sbjct 250 CCTGACGGGGAGAGAG 265 >seq78530 Length=11260263 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| ||| ||||| | |||||||| |||||||||||| Sbjct 2848853 TCCTCGTTAGTATAGTGGTAAGTATCCCCACCTGTCACGCGGGAGACTGGGGTTCGATTC 2848794 Query 8718 CCCGACGAGGAG 8729 |||||| |||| Sbjct 2848793 CCCGACAGGGAG 2848782 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| ||| ||||| | |||||||| |||||||||||| Sbjct 2848853 TCCTCGTTAGTATAGTGGTAAGTATCCCCACCTGTCACGCGGGAGACTGGGGTTCGATTC 2848794 Query 11789 CCCGACGAGGAGG 11801 |||||| ||||| Sbjct 2848793 CCCGACAGGGAGG 2848781 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||||||| ||||||||| |||||||| | |||| ||||||| | ||||||| Sbjct 2848782 CTCCCTGTCGGGGAATCGAACCCCAGTCTCCCGCGTGACAGGTGGGGATACTTACCACTA 2848841 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 2848842 TACTAACGAGGAT 2848854 >seq78548 Length=5655555 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 8649 ATGCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGG 8708 ||||| |||||| ||||||||||||| ||||| |||| ||||| ||| ||||||| || Sbjct 906768 ATGCCCCTTTCCTCATTAGTATAGTGGTGAGTATCCCCGCCTGTCACACAGGAGACCAGG 906709 Query 8709 GTTCGATTCCCCGACGAGGAG 8729 ||| |||||||||| | |||| Sbjct 906708 GTTTGATTCCCCGAAGGGGAG 906688 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||| ||||||||||||| ||||| |||| ||||| ||| ||||||| ||||| ||||| Sbjct 906759 TCCTCATTAGTATAGTGGTGAGTATCCCCGCCTGTCACACAGGAGACCAGGGTTTGATTC 906700 Query 11789 CCCGACGAGGAGGG 11802 ||||| | |||||| Sbjct 906699 CCCGAAGGGGAGGG 906686 >seq16958 Length=887 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||| |||||||||||||| ||||| || | ||||| | |||||||| |||||||||| Sbjct 189 TTCCTTGTTAGTATAGTGGTGAGTATCCCTGCCTGTCACGTGGGAGACCAGGGTTCGATT 248 Query 8717 CCCCGACGAGGAGCAGAG 8734 |||||||| |||| |||| Sbjct 249 CCCCGACGGGGAG-AGAG 265 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||| |||||||||||||| ||||| || | ||||| | |||||||| ||||||||||| Sbjct 190 TCCTTGTTAGTATAGTGGTGAGTATCCCTGCCTGTCACGTGGGAGACCAGGGTTCGATTC 249 Query 11789 CCCGACGAGGAGGGAG 11804 ||||||| |||| ||| Sbjct 250 CCCGACGGGGAGAGAG 265 >seq1106 Length=51910 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||| |||||||||||||| ||||| || | ||||| | |||||||| |||||||||| Sbjct 4595 TTCCTTGTTAGTATAGTGGTGAGTATCCCTGCCTGTCACGTGGGAGACCAGGGTTCGATT 4536 Query 8717 CCCCGACGAGGAGCAGAG 8734 |||||||| |||| |||| Sbjct 4535 CCCCGACGGGGAG-AGAG 4519 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||| |||||||||||||| ||||| || | ||||| | |||||||| ||||||||||| Sbjct 4594 TCCTTGTTAGTATAGTGGTGAGTATCCCTGCCTGTCACGTGGGAGACCAGGGTTCGATTC 4535 Query 11789 CCCGACGAGGAGGGAG 11804 ||||||| |||| ||| Sbjct 4534 CCCGACGGGGAGAGAG 4519 >seq81 Length=4821437 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 8659 CCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCC 8718 |||| ||||||||||||| ||||| ||| ||||| | ||||||||| |||||||||||| Sbjct 917728 CCTCATTAGTATAGTGGTGAGTATCCCCACCTGTCACGCGGGAGACCAGGGTTCGATTCC 917669 Query 8719 CCGACGAGGAG 8729 ||||| |||| Sbjct 917668 CCGACAGGGAG 917658 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11731 CCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCC 11789 |||| ||||||||||||| ||||| ||| ||||| | ||||||||| |||||||||||| Sbjct 917728 CCTCATTAGTATAGTGGTGAGTATCCCCACCTGTCACGCGGGAGACCAGGGTTCGATTCC 917669 Query 11790 CCGACGAGGAGG 11801 ||||| ||||| Sbjct 917668 CCGACAGGGAGG 917657 >seq6 Length=62603786 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATT--CCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 |||| ||||||||||||||| |||||| |||| ||||| | |||||||| |||||||| Sbjct 4376772 TTCCCCGTTAGTATAGTGGTGAGTATTCCCCCGCCTGTCACGTGGGAGACCAGGGTTCGA 4376831 Query 8715 -TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 4376832 TTTCCCCGACGGGGAG 4376847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652203420786800