Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq78565 104 6e-17
>seq78565
Length=14964121
Score = 104 bits (114), Expect = 6e-17
Identities = 160/228 (70%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| ||| ||||| | || || ||||| ||||| ||||||| ||
Sbjct 6183748 AAAATG---CAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTGGAAGTAGAG 6183804
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
||||| | || || ||| || || ||||| |||||||| ||| ||
Sbjct 6183805 CCCAGCGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCA 6183864
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| || || || ||||| |||||||||||| |||||||||| | || || ||||
Sbjct 6183865 GACCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGAC 6183924
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
|||||| |||||||||| || ||||| ||| | || || | || |||
Sbjct 6183925 TACAACATCCAGAAAGAATCCACTCTGCACTTGGTCCTGCGCCTCCGA 6183972
Score = 100 bits (110), Expect = 7e-16
Identities = 110/145 (76%), Gaps = 1/145 (1%)
Strand=Plus/Plus
Query 206247 AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGC 206306
||||| ||| || ||||| |||||||| ||| || ||| || || || ||||| ||
Sbjct 6184285 AAAGCCAAA-ATCCAAGACAAAGAAGGCATTCCTCCAGACCAGCAGAGGCTGATCTTTGC 6184343
Query 206307 CGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTAC 206366
|||||||||| |||||||||| | || || |||| |||||| |||||||||| || ||
Sbjct 6184344 CGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACATCCAGAAAGAATCCAC 6184403
Query 206367 TCTTCACCTTGTTTTGAGACTTCGA 206391
||| ||| | || || | || |||
Sbjct 6184404 TCTGCACTTGGTCCTGCGCCTCCGA 6184428
Score = 93.3 bits (102), Expect = 1e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| | || || ||||| ||||| | ||||| || |||
Sbjct 6183982 CAGATCTTTGTGAAAACCTTGACGGGCAAAACCATCACCCTAGAAGTAGAGCCCAGCGAC 6184041
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| || || || || |||||||| ||| || ||| ||
Sbjct 6184042 ACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCAGACCAGCAG 6184101
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||| |||||||||||| |||||||||| | || || |||| |||||| ||
Sbjct 6184102 AGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACATC 6184161
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
|||||||| || ||||| ||| | || || | || |||
Sbjct 6184162 CAGAAAGAATCCACTCTGCACTTGGTCCTGCGCCTCCGA 6184200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1180630708300995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |