Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq78553 100 3e-16
seq2 100 3e-16
seq78549 91.5 2e-13
>seq78553
Length=7957922
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|||||||||||||| | |||||| | || || ||||| ||||| || || |||||
Sbjct 5755020 GTGAAGATGTATCGAGGGCTGGCAGAGTCTTTTCCACCATGCAGCCTGGTACCGAACTGA 5755079
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| ||||| || ||||||||||| ||| |||||||| |||||||||||||| | |
Sbjct 5755080 CCAATGGGCTGTAGCAGGTTGAGGTTATTGCTTCCCACGAAGTTCTGAGCCAAATTAATA 5755139
Query 152149 ATCGT 152153
|| ||
Sbjct 5755140 ATGGT 5755144
>seq2
Length=68452538
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||| ||||||| ||| ||||||||||| |||||| ||| | ||||| || ||
Sbjct 20431519 GTGAAAATATAACGAGGGCTGGCAGCATCCTTCCCACCATGAAGCCTGGTACCAAACTGA 20431578
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| || || || | ||||| || |||||||| |||||||||||||||
Sbjct 20431579 CCAATAGGCTGCAGTAGATTAACATTGTTACTTCCAACAAAGTTCTGAGCCAAGTTGACA 20431638
Query 117425 ATCGT 117429
|| ||
Sbjct 20431639 ATAGT 20431643
>seq78549
Length=11360908
Score = 91.5 bits (100), Expect = 2e-13
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| || | |||||| ||||| | || |||||||| | || | |||||||
Sbjct 7628611 TCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAACCCTCTCTTCTTC 7628670
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
||||||||||||| ||||| ||| ||||||||| ||||| || ||||| ||
Sbjct 7628671 AACCAAAAGATGGATGCAAAGGAGCCAGAGAAGAAGATTCCTTCCACTGCTGCAAAAGCT 7628730
Query 74892 ACAAGGCGTT 74901
|| | ||||
Sbjct 7628731 ACTACACGTT 7628740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546678394481000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |