Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 3e-17
>seq3
Length=75876001
Score = 104 bits (114), Expect = 3e-17
Identities = 125/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATT 32720
||||| | || || |||| || ||| |||| ||||| || || || | || || ||
Sbjct 66048343 ATAGCTGGTGCTTTATGGTGGTACTTTGTCTCAAAAGGAATTGAGTACTTGGACACAATA 66048402
Query 32721 TTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTT 32780
|| ||||| |||| ||||||||||||||| | || || | || || || ||||||||
Sbjct 66048403 TTTTTCATCTTGAGGAAGAAATTTAACCAAATCAGTTTCCTTCATGTCTATCACCATTTC 66048462
Query 32781 ACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830
|| ||||| || || | ||||| || || || ||| || ||||||||||
Sbjct 66048463 ACTATGTTCACCTTGTGGTGGATTGGTATCAAGTGGGTTCCAGGAGGACA 66048512
Score = 102 bits (112), Expect = 1e-16
Identities = 98/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 32982 GGTCATACAGCAATGTCTATATATATAGATTGTCCGTTCCCTAGATGGATACAGTGGGCT 33041
|| || ||||| |||||||| ||||| || ||||| ||||||| |||||| || |||| |
Sbjct 66056721 GGCCACACAGCCATGTCTATTTATATCGACTGTCCCTTCCCTAAATGGATGCACTGGGGT 66056780
Query 33042 GTTATTATATATTCTATCACCTTTATCATCCTTTTTGGCAACTTTTA-TCTCAGGACATA 33100
|| || || ||| | ||||||||||| || | ||||| ||||| || | || |||||||
Sbjct 66056781 GTAATGATCTATGCCATCACCTTTATTTTCTTGTTTGGTAACTTCTACTATC-GGACATA 66056839
Query 33101 TAA 33103
|||
Sbjct 66056840 TAA 66056842
Score = 84.2 bits (92), Expect = 3e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 32832 GCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGA 32891
|| ||||||||||| || || ||||||||||| |||||| | ||||| | || || |||
Sbjct 66054388 GCTTTTTTTGGAGCCCAAATGAATTCTTTTATTCATGTTGTTATGTACATGTACTATGGA 66054447
Query 32892 TTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATC 32951
||| | || || ||| || | |||||||| ||||||||| ||| || || ||
Sbjct 66054448 TTAGCTGCCTGTGGCCCTAAATTTCAGAAATATCTGTGGTGGAAACGATACTTGACCATA 66054507
Query 32952 ATACAATTG 32960
||||||||
Sbjct 66054508 TTACAATTG 66054516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 602588212562800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |