Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq78526 107 2e-18
>seq78526
Length=7101863
Score = 107 bits (118), Expect = 2e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001
|| || ||||| || || ||||| || ||||| || || ||||||||||| || || ||
Sbjct 5468950 AGGCCTGTGACATGGGCAATCATATATGTGAGCAGTGAATAGCTGGCGATATTGAAAGGC 5469009
Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
||||| || |||||||| || || ||||| || | ||| || || || || || |
Sbjct 5469010 ACCCCCAGTCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGA 5469069
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105
|| |||||||| |||| |||||||| ||||| | | |||| ||
Sbjct 5469070 ACATAAAACTGGCACAGAGCGTGGCATGGAGGCAAAACCATTAG 5469113
Score = 93.3 bits (102), Expect = 3e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 30222 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30281
|||| || |||| || ||||| || || ||||||||||| || ||||| ||||||| |
Sbjct 5479899 TCATATCTTTGTATTCAGCTCCAAAGTGTCTCCACTGGAAACCATACACTGGTCCCAAAT 5479958
Query 30282 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341
| || ||| |||| ||| || || ||||| || || | || || ||||| |
Sbjct 5479959 CCCCTTCTGTTCTGTCAGTGAAACCTTGTTTATCCAAGAATTCACGTGATCCATTGGCAT 5480018
Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390
|||| ||||| || || || ||||||||||||| | ||||| || ||
Sbjct 5480019 CCCAAATCTTCACTCCTTTTGCAGAGAGCTCTTTAGCATTTGTTGAACC 5480067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405921204790740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |