Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq78526 102 7e-17 >seq78526 Length=7101863 Score = 102 bits (112), Expect = 7e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| || ||||| || |||||||| | || || || || ||||| |||||||| | Sbjct 5468958 GACATGGGCAATCATATATGTGAGCAGTGAATAGCTGGCGATATTGAAAGGCACCCCCAG 5469017 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||||||||| |||| ||||| | |||||| ||||| || ||||| || || || Sbjct 5469018 TCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGAACATAAAA 5469077 Query 6736 TTGGCAGAGGGTGTGGCACGGGGG 6759 ||||| || | |||||| || || Sbjct 5469078 CTGGCACAGAGCGTGGCATGGAGG 5469101 Score = 102 bits (112), Expect = 7e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 34586 CCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTC 34645 || || |||||| | || ||||| || || || ||||| || ||||| |||||| | Sbjct 5469101 CCTCCATGCCACGCTCTGTGCCAGTTTTATGTTCTAAATGGTGAACTGTCTTGCCAGTTG 5469042 Query 34646 TATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTG 34705 ||||| |||| ||||||||||| | |||||||| ||||| || || || || | ||| Sbjct 5469041 TATCAGAGATCTGGAGACATGGGACTGGGGGTGCCTTTCAATATCGCCAGCTATTCACTG 5468982 Query 34706 CTCACGTACATGATCGCTCATGTC 34729 ||||| || ||||| || |||||| Sbjct 5468981 CTCACATATATGATTGCCCATGTC 5468958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447822010208400