Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq78526 102 7e-17
>seq78526
Length=7101863
Score = 102 bits (112), Expect = 7e-17
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
|||||| || ||||| || |||||||| | || || || || ||||| |||||||| |
Sbjct 5468958 GACATGGGCAATCATATATGTGAGCAGTGAATAGCTGGCGATATTGAAAGGCACCCCCAG 5469017
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
||||||||||| |||| ||||| | |||||| ||||| || ||||| || || ||
Sbjct 5469018 TCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGAACATAAAA 5469077
Query 6736 TTGGCAGAGGGTGTGGCACGGGGG 6759
||||| || | |||||| || ||
Sbjct 5469078 CTGGCACAGAGCGTGGCATGGAGG 5469101
Score = 102 bits (112), Expect = 7e-17
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 34586 CCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTC 34645
|| || |||||| | || ||||| || || || ||||| || ||||| |||||| |
Sbjct 5469101 CCTCCATGCCACGCTCTGTGCCAGTTTTATGTTCTAAATGGTGAACTGTCTTGCCAGTTG 5469042
Query 34646 TATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTG 34705
||||| |||| ||||||||||| | |||||||| ||||| || || || || | |||
Sbjct 5469041 TATCAGAGATCTGGAGACATGGGACTGGGGGTGCCTTTCAATATCGCCAGCTATTCACTG 5468982
Query 34706 CTCACGTACATGATCGCTCATGTC 34729
||||| || ||||| || ||||||
Sbjct 5468981 CTCACATATATGATTGCCCATGTC 5468958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447822010208400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |