Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq78526 120 3e-22
seq70 111 1e-19
>seq78526
Length=7101863
Score = 120 bits (132), Expect = 3e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|| ||||| | || |||||||| ||||| | || |||||||| | ||| |||||
Sbjct 5468950 AGGCCTGTGACATGGGCAATCATATATGTGAGCAGTGAATAGCTGGCGATATTGAAAGGC 5469009
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| ||||| ||||||||| | |||||||| ||||| |||||||| || || || ||| |
Sbjct 5469010 ACCCCCAGTCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGA 5469069
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694
||||||||||| | | ||| |||||||||| ||||||
Sbjct 5469070 ACATAAAACTGGCACAGAGCGTGGCATGGAGGCAAAACCAT 5469110
>seq70
Length=5566888
Score = 111 bits (122), Expect = 1e-19
Identities = 138/189 (73%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || ||||| |||||||||||||| |||||||| | || || || ||||||||
Sbjct 1249774 GTGGTGGAGGAGCTGTTCCGAGATGGGGTTAACTGGGGAAGGATCGTGGCCTTCTTTGAA 1249833
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| ||||| || ||||| ||||| ||||| ||| | | || | | || || |||| |
Sbjct 1249834 TTCGGTGGCGTGATGTGCGTGGAGAGCGTTAATCGGGAGATGTCGCCTCTTGTGGACAGC 1249893
Query 3365 ATTGCCGCGTGGATGACAGACCAGCTGGGTGGAGAGGTTGGTTTGTGGATCCAAGAGAAC 3424
||||| | ||||||||| || | ||| || | | | ||||||||||| |||
Sbjct 1249894 ATTGCTGTGTGGATGACCGAGTACCTGAACAGACACCTACATAACTGGATCCAAGACAAC 1249953
Query 3425 GGAGGATGG 3433
||||| |||
Sbjct 1249954 GGAGGCTGG 1249962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414079782387580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |