Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq78565 95.1 1e-14
>seq78565
Length=14964121
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089
|||| ||||| ||| |||||||| || || ||||| |||| || || |||||||
Sbjct 6183959 ACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 6183900
Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149
| || || || ||| | || ||||| || |||||| || | ||||||||||||
Sbjct 6183899 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCTTTGTCTTGG 6183840
Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209
||||| || |||| | | || || ||| | | ||| | ||| || ||||||
Sbjct 6183839 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCTACTTCCAGGGTGATGGTTTTG 6183780
Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATT 101239
|||||||| ||||| | ||| || ||||||
Sbjct 6183779 CCCGTCAAGGTTTTCACAAAGATCTGCATT 6183750
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089
|||| ||||| ||| |||||||| || || ||||| |||| || || |||||||
Sbjct 6184187 ACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 6184128
Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149
| || || || ||| | || ||||| || |||||| || | ||||||||||||
Sbjct 6184127 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCTTTGTCCTGG 6184068
Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209
||||| || |||| | | || || ||| | | ||| | ||| || ||||||
Sbjct 6184067 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCTACTTCTAGGGTGATGGTTTTG 6184008
Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|||||||| ||||| | ||| || |||||
Sbjct 6184007 CCCGTCAAGGTTTTCACAAAGATCTGCAT 6183979
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089
|||| ||||| ||| |||||||| || || ||||| |||| || || |||||||
Sbjct 6184415 ACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 6184356
Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149
| || || || ||| | || ||||| || |||||| || | ||||||||||||
Sbjct 6184355 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCTTTGTCTTGG 6184296
Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209
||||| ||| |||| | | || || ||| | | || | ||| || ||||||
Sbjct 6184295 ATTTTGGCTTTGACATTCTCAATGGTGTCGCTGGGCTCTACCTCTAGGGTGATGGTTTTG 6184236
Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|||||||| ||||| | ||| || |||||
Sbjct 6184235 CCCGTCAAGGTTTTCACAAAGATCTGCAT 6184207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409268395521105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |