Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq78565 95.1 1e-14 >seq78565 Length=14964121 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||||| ||| |||||||| || || ||||| |||| || || ||||||| Sbjct 6183959 ACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 6183900 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | || || || ||| | || ||||| || |||||| || | |||||||||||| Sbjct 6183899 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCTTTGTCTTGG 6183840 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 ||||| || |||| | | || || ||| | | ||| | ||| || |||||| Sbjct 6183839 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCTACTTCCAGGGTGATGGTTTTG 6183780 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATT 101239 |||||||| ||||| | ||| || |||||| Sbjct 6183779 CCCGTCAAGGTTTTCACAAAGATCTGCATT 6183750 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||||| ||| |||||||| || || ||||| |||| || || ||||||| Sbjct 6184187 ACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 6184128 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | || || || ||| | || ||||| || |||||| || | |||||||||||| Sbjct 6184127 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCTTTGTCCTGG 6184068 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 ||||| || |||| | | || || ||| | | ||| | ||| || |||||| Sbjct 6184067 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCTACTTCTAGGGTGATGGTTTTG 6184008 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCAT 101238 |||||||| ||||| | ||| || ||||| Sbjct 6184007 CCCGTCAAGGTTTTCACAAAGATCTGCAT 6183979 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||||| ||| |||||||| || || ||||| |||| || || ||||||| Sbjct 6184415 ACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 6184356 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | || || || ||| | || ||||| || |||||| || | |||||||||||| Sbjct 6184355 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCTTTGTCTTGG 6184296 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 ||||| ||| |||| | | || || ||| | | || | ||| || |||||| Sbjct 6184295 ATTTTGGCTTTGACATTCTCAATGGTGTCGCTGGGCTCTACCTCTAGGGTGATGGTTTTG 6184236 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCAT 101238 |||||||| ||||| | ||| || ||||| Sbjct 6184235 CCCGTCAAGGTTTTCACAAAGATCTGCAT 6184207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409268395521105