Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq11386 208 8e-49 seq78549 84.2 2e-11 seq97 84.2 2e-11 >seq11386 Length=553 Score = 208 bits (230), Expect = 8e-49 Identities = 172/209 (82%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 ||||||||||| ||||||||| |||||||||| ||||| | ||||||||||||||| Sbjct 300 TCTCACTCTGTCACCCAGGCTGTAGTGCAGTGGTGCGATCTTGGGTCACTGCAACCTCCG 359 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAG--GC 8461 ||| || ||||||||| ||||| | ||| |||||||| ||||||||||| |||||| || Sbjct 360 CCTGCCAGGTTCAAGCAATTCTTCCGCCCCAGCCTCCCGAGTAGCTGGGGTTACAGGTGC 419 Query 8462 AAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTT 8521 |||| |||| || | ||| ||||||| |||||||| ||||||||||| ||| Sbjct 420 CTGCCCCACGGCGCCTGACTCAATTTCGTATTTTCAGTAGAGACGGGGTTTCACCACGTT 479 Query 8522 GGCCAGGCTGGTCTCGAACTCCTGACCTC 8550 |||| |||||||||||||||||||||||| Sbjct 480 GGCCGGGCTGGTCTCGAACTCCTGACCTC 508 >seq78549 Length=11360908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || || || | |||||||||||| || | ||| |||||||| |||| || || Sbjct 7628611 TCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAACCCTCTCTTCTTC 7628670 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | |||||| || | ||||| || || || ||||| || || || || || ||||| || Sbjct 7628671 AACCAAAAGATGGATGCAAAGGAGCCAGAGAAGAAGATTCCTTCCACTGCTGCAAAAGCT 7628730 Query 23653 ACAAGACGT 23661 || | |||| Sbjct 7628731 ACTACACGT 7628739 >seq97 Length=4319533 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596 |||||||||| |||| | ||||| || ||||| ||||||||| ||| ||||||||||| Sbjct 209094 GAACTCCTGAGCTCAAGCGATCCGCCGGCCTCAGCCTCCCAAGTAGCTAGGATTACAGGC 209153 Query 8597 ATGAGCCACCGCGCCTGGC 8615 || ||||||||||| ||| Sbjct 209154 GTGCGCCACCGCGCCCGGC 209172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520975670633000