Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13] 70 sequences; 2,049,536,252 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 >seq1 Length=270692262 Score = 123 bits (136), Expect = 2e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457 || |||||||| || || |||||| || |||||||| || |||| ||| || | Sbjct 186506300 TTGATGGCTTTACCCCCTTGTCATGCTCTCTGCCAATTCTATGTTGTAAATGGCGAGCTT 186506241 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || || || ||||||| |||| | ||||||||||| || || |||||||||||||| Sbjct 186506240 TCTTGCCAGCTGTATCAGAGATCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCC 186506181 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 |||||| | ||||| |||||||||||||| ||||| || Sbjct 186506180 AGTTATTCACTGCTCACGTATATGATTGCTCATGTGAC 186506143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183659446150