Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13] 70 sequences; 2,049,536,252 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq47 87.8 2e-12 >seq47 Length=18085138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | ||||| || || | ||||| || | || ||| | || || ||| | Sbjct 16075473 CAATATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCC 16075414 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || |||||||| ||| | || || ||||| |||||||||||||| || || || Sbjct 16075413 CAGTGACACCATTGAGAATGTGAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCCCTGA 16075354 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 || ||||| ||||| | | |||||||| || ||||||| | | | | | || || Sbjct 16075353 CCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTA 16075294 Query 24167 TAACATTCAAAAAGAATCTAC 24187 ||||| || || ||||| || Sbjct 16075293 CAACATCCAGAAGGAATCCAC 16075273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935633210850