Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13] 70 sequences; 2,049,536,252 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 >seq1 Length=270692262 Score = 116 bits (128), Expect = 3e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || |||||||||| |||||| || | || ||||| |||||||| || ||||| Sbjct 186506137 AGGCCCGTCACATGAGCAATCATATACGTGAGCAGTGAATAACTGGCAATATTGAAAGGC 186506196 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||| | ||||| ||||| || |||||||||||||| || |||||||| || | | Sbjct 186506197 ACTCCTAGTCCCATATCTCCAGATCTCTGATACAGCTGGCAAGAAAGCTCGCCATTTACA 186506256 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGA 20403 ||||| ||||| || | ||||| || || | |||||||| || Sbjct 186506257 ACATAGAATTGGCAGAGAGCATGACAAGGGGGTAAAGCCATCAAGGA 186506303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372413798800