Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13] 70 sequences; 2,049,536,252 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq33 82.4 7e-11 >seq33 Length=109106476 Score = 82.4 bits (90), Expect = 7e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 47502 GAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG 47561 ||||||||||| || |||||| | |||||||| || || |||||||| ||||| || ||| Sbjct 25981031 GAGAATCCATTTGACTTTATGGAGAACATTTCACTTGAAGGCAAGACAAACTTCTTTGAG 25980972 Query 47562 AAGCGCGTCGGCGAATAT 47579 ||| | || ||||||||| Sbjct 25980971 AAGAGAGTAGGCGAATAT 25980954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500383936800