Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13]
70 sequences; 2,049,536,252 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq21 102 2e-16
seq1 91.5 3e-13
>seq21
Length=203625132
Score = 102 bits (112), Expect = 2e-16
Identities = 113/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091
|||| | ||||||||| || || ||||| || || ||||| || || | ||||||
Sbjct 200398399 ACCCGTTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAGAGGTCCCTAGCTCGCTGC 200398458
Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151
|||||| ||| |||| ||| ||| ||||| ||||||||| || || ||||||||||
Sbjct 200398459 TCCTCCTTCCCGGTGTTCTTCTTCAAATCCAGAAACTCAAAGATATCCAAGTGCCACGGC 200398518
Query 222152 TCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182
||||| || | ||| | ||| || |||| ||
Sbjct 200398519 TCCAGGTAAATGGCAAAAGCCCCAGGTCTCT 200398549
>seq1
Length=270692262
Score = 91.5 bits (100), Expect = 3e-13
Identities = 98/127 (77%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942
|||| ||||||||||| ||||| || || || ||| || || ||||| ||||| || |
Sbjct 235935992 TGGTTGCCTTTGCTGCAGTGGAAGGAATTTTCTTCTCAGGATCTTTTGCTGCCATATTTT 235935933
Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGG 26001
|||| ||| ||| || ||||| || ||| ||||| ||||| |||||||| |||||
Sbjct 235935932 GGCTGAAGAAGAGAGGCCTGATGCCTGGACTG-ACTTTCTCCAATGAGCTCATTAGCAGA 235935874
Query 26002 GACGAGG 26008
|||||||
Sbjct 235935873 GACGAGG 235935867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843987260800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |